Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq579 181 9e-41 seq187 136 3e-27 seq45 113 4e-20 >seq579 Length=22240 Score = 181 bits (200), Expect = 9e-41 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||||||||||||||| |||||||| ||||| | ||||| ||| | | Sbjct 1153 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACTATCACTTTAGAAGTAGAATCTTCT 1094 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| ||||||||||| || || ||||||||||| || ||| Sbjct 1093 GATACCATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAA 1034 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || || || ||||| ||||| ||| || || | || ||||||||| Sbjct 1033 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 974 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 |||||||| ||||| || | |||||||| || || Sbjct 973 ATTCAAAAGGAATCTACACTTCATTTAGTCTTACG 939 Score = 170 bits (188), Expect = 2e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| |||||||| ||||| || ||| | || ||||| || ||||||||||||| ||| | Sbjct 1385 AAAAATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACTATCACTCTTGAAGTTGAATC 1326 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | ||||| | || || | ||| ||||||||||| || || ||||||||||| || Sbjct 1325 TTCTGATACTATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCTGA 1266 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||||||||||||||| || || || ||||| ||||| ||| || || | || ||||| Sbjct 1265 TCAACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTA 1206 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| ||||| ||||| ||| | || |||||| | || || || || ||| Sbjct 1205 CAACATCCAAAAGGAATCTACCCTTCACTTAGTTCTTCGTTTACGTGGTGGT 1154 >seq187 Length=118869 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 |||||||||| || || ||||| | || ||||| || | || ||||| || ||| || Sbjct 40961 AGATGCAAATCTTCGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTCGAATCCT 41020 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| || | || || ||||| || || ||||| ||||| ||||| ||||| || | Sbjct 41021 CCGACACTATCGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATCCCACCAGACC 41080 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 ||||||||||||| |||||||| || || ||||| ||| || || | || || |||| Sbjct 41081 AACAACGTCTTATCTTTGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACA 41140 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| ||||| ||||| || | || | ||| | || || || || ||| Sbjct 41141 ACATCCAAAAGGAATCTACTCTCCACCTTGTTCTTCGTTTACGTGGTGGT 41190 >seq45 Length=243278 Score = 113 bits (124), Expect = 4e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 22225 ATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACC 22284 |||||||| || || | ||||| || || |||| ||||| || ||| | |||| | | Sbjct 63634 ATTTTTGTAAAGACCCTTACCGGAAAGACTATCACCCTTGAGGTTGAATCTTCCGACAGC 63575 Query 22285 GTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGT 22344 | | || | || | || || ||||| ||||| ||||||||||| |||||||||||| Sbjct 63574 ATTGTTAATGTAAAGAACAAGATCCAAGAAAAGGAAGGTATTCCACCAGATCAACAACGT 63515 Query 22345 CTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAA 22404 | || || || || || || ||||| ||| |||| || |||| || |||||||| ||| Sbjct 63514 TTAATCTTCGCTGGTAAGCAATTAGAAGATGACCGTACTCTCTCTGACTACAACATCCAA 63455 Query 22405 AA 22406 || Sbjct 63454 AA 63453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419719528839640