Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq579 152 4e-32 seq45 102 7e-17 >seq579 Length=22240 Score = 152 bits (168), Expect = 4e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | || |||||||| | |||||||| ||||||||||||||||| Sbjct 927 CCACCACGAAGACGTAAGACTAAATGAAGTGTAGATTCCTTTTGAATGTTGTAATCAGAA 986 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||||||| |||||| | ||||||||||||| | || ||||| |||||||| || ||| Sbjct 987 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGA 1046 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGAC 114334 || |||||||| || ||| ||| | |||| | | ||||| ||| || | ||||| || Sbjct 1047 ATACCTTCTTTATCTTGAAT-TTTGGCTTTAACATTTTCAATGGTATCAGAAGATTCTAC 1105 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||||| || || | |||||| ||||| || ||||| Sbjct 1106 TTCTAAAGTGATAGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1153 Score = 143 bits (158), Expect = 2e-29 Identities = 179/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||||| | | |||||| || | |||||||| ||||| ||||||||||| Sbjct 1152 ATACCACCACGTAAACGAAGAACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAATCA 1211 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | ||||||||||||| | || ||||| ||||| || || Sbjct 1212 GAAAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCAGGT 1271 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| |||||||| || ||| ||| | |||| | | ||||| || || | ||||| Sbjct 1272 GGAATACCTTCTTTATCTTGAAT-TTTGGCTTTAACATTTTCAATAGTATCAGAAGATTC 1330 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAATT 114391 || || | || | || || || || ||||| |||||||| || ||||| ||| || Sbjct 1331 AACTTCAAGAGTGATAGTCTTACCAGTAAGAGTCTTTACAAAGATTTGCATTTTTTATTT 1390 Query 114392 ATT 114394 ||| Sbjct 1391 ATT 1393 >seq45 Length=243278 Score = 102 bits (112), Expect = 7e-17 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 ||||| |||||||| || | |||||| |||||| | ||| ||||||||| |||| Sbjct 63453 TTTTGGATGTTGTAGTCAGAGAGAGTACGGTCATCTTCTAATTGCTTACCAGCGAAGATT 63512 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | ||| ||||| || || ||||| ||||| || || ||||| | |||| | || Sbjct 63513 AAACGTTGTTGATCTGGTGGAATACCTTCCTTTTCTTGGATCTTGTTCTTTACATTAACA 63572 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 | | |||||| ||||| || || | ||| | || || ||||| || || ||||||||| Sbjct 63573 ATGCTGTCGGAAGATTCAACCTCAAGGGTGATAGTCTTTCCGGTAAGGGTCTTTACAAAA 63632 Query 114375 ATCT 114378 |||| Sbjct 63633 ATCT 63636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420125920637472