Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq579 116 4e-21 >seq579 Length=22240 Score = 116 bits (128), Expect = 4e-21 Identities = 157/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 64230 TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGT 64289 |||| |||| ||||| || ||||| ||||||||||||||||| | | || || | | Sbjct 941 TAAG-ACTAAATGAAGTGTAGATTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACCAT 999 Query 64290 CTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTT 64349 |||| | || || || || |||| || || || ||||| || ||||| |||||||| | Sbjct 1000 CTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTAT 1059 Query 64350 CTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 |||| | |||| ||||| ||| || | |||||| | || ||||||| ||| | Sbjct 1060 CTTG-AATTTTGGCTTTAACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTGATA 1118 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || || |||||||| || || |||||||| Sbjct 1119 GTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1153 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || || | ||| |||| |||| || ||||| ||||| ||||||||||| | Sbjct 1154 ACCACCACGTAAACGAAGAACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAATCAGA 1213 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| | || || || || |||| || || || || || || || Sbjct 1214 AAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCAGGTGG 1273 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| |||||||| ||||| | |||| ||||| ||| || | |||||| | || | Sbjct 1274 AATACCTTCTTTATCTTG-AATTTTGGCTTTAACATTTTCAATAGTATCAGAAGATTCAA 1332 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||| | ||| | ||||| || || | ||| ||||| || ||||||||||| Sbjct 1333 CTTCAAGAGTGATAGTCTTACCAGTAAGAGTCTTTACAAAGATTTGCATTTT 1384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634457352640