Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq579 116 4e-21 seq187 98.7 1e-15 >seq579 Length=22240 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || |||||||| | | || ||||||||||||||||| || Sbjct 927 CCACCACGAAGACGTAAGACTAAATGAAGTGTAGATTCCTTTTGAATGTTGTAATCAGAA 986 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | || ||||| |||||||| || || Sbjct 987 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGA 1046 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| |||| | ||||| | ||| | ||| || | || || || Sbjct 1047 ATACCTTCTTTATC-TTGAATTTTGGCTTTAACATTTTCAATGGTATCAGAAGATTCTAC 1105 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| | |||||| ||||| || ||||| Sbjct 1106 TTCTAAAGTGATAGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1153 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || ||||| | |||||| || | | | || |||||||| |||||||| || Sbjct 1155 CCACCACGTAAACGAAGAACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAATCAGAA 1214 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||| | | || ||||| ||||| || || || Sbjct 1215 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCAGGTGGA 1274 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||||||||| || ||| |||| | ||||| | ||| | || || | || || || Sbjct 1275 ATACCTTCTTTATC-TTGAATTTTGGCTTTAACATTTTCAATAGTATCAGAAGATTCAAC 1333 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| ||||| |||||||| || ||||| Sbjct 1334 TTCAAGAGTGATAGTCTTACCAGTAAGAGTCTTTACAAAGATTTGCAT 1381 >seq187 Length=118869 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || ||||| | ||| | || | | || |||||||| ||||||||||| Sbjct 41189 CCACCACGTAAACGAAGAACAAGGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAA 41130 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||| ||||||| | |||| ||||| |||||||| || || Sbjct 41129 AGAGTACGACCATCTTCTAATTGCTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGGG 41070 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| || ||| | | ||| | ||||||| || || ||| Sbjct 41069 ATACCTTCCTTATCTTGGATCTTAGCTTTGACATTTTCGATAGTGTCGGAGGATTCGACC 41010 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || || ||||| || || || ||||| Sbjct 41009 TCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACGAAGATTTGCAT 40963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496252127368320