Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq435 98.7 1e-15 seq11 91.5 2e-13 seq374 86.0 7e-12 seq15 84.2 2e-11 >seq435 Length=48039 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/180 (73%), Gaps = 8/180 (4%) Strand=Plus/Plus Query 61987 CATTACATTTCCTTGGT------GAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGAC 62040 ||||| |||| | |||| ||| ||||| |||||||| || | || |||| || Sbjct 24946 CATTAAATTTACATGGTATCATGGAAGGTACGAGCAATAACTTCTCTTTGTTGTTGTGGG 25005 Query 62041 GTCAGAG-AATTAAATCGGACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTT 62099 || || ||| |||| | |||||||||||||||||||||||||| | | ||||| || Sbjct 25006 GTAAGTCTAATGAAAT-GTACAGCATAACCAGAAACACGAATAGTTAAGTTTGGATAGTT 25064 Query 62100 TTCTGGATGTTGAACTGCATCTTCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATG 62159 ||||||||| | ||||||||||| || |||| | | ||||| ||||| | ||| Sbjct 25065 TTCTGGATGAATCATAGCATCTTCTAATGTAGATTTATTTAATACATTAACGTTTAAATG 25124 >seq11 Length=440999 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 62059 ACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCA 62118 |||||||||||||||||||||||||| || | ||||| ||||||||||| | ||| Sbjct 181016 ACAGCATAACCAGAAACACGAATAGTAAGGTTTGGATAGTTTTCTGGATGAGCCATAGCA 180957 Query 62119 TCTTCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACC 62168 |||||||||||||| | ||||| || || || ||||| || |||| Sbjct 180956 TCTTCTAAAGTTTCACGCTTAAGAACGTTAACATTAAGATGATGAGCACC 180907 >seq374 Length=59602 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/114 (77%), Gaps = 6/114 (5%) Strand=Plus/Minus Query 62058 GACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGC 62117 |||||| |||||||| |||||||| || || | ||||| ||||||||||| | || Sbjct 33733 GACAGCGTAACCAGAGACACGAATGGTAAGGTTTGGATAGTTTTCTGGATGAGCCATAGC 33674 Query 62118 ATCTTCTAAAGTTTC---TTTAGTCAGAACATTCACGTTCAGATGTTGGCCACC 62168 ||||||||||||||| |||| ||||| || ||||| ||||| || |||| Sbjct 33673 ATCTTCTAAAGTTTCACGTTTA---AGAACGTTAACGTTGAGATGGTGAGCACC 33623 >seq15 Length=405292 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/205 (70%), Gaps = 12/205 (6%) Strand=Plus/Minus Query 61970 TTGATATCTTC-AATTGACATTACATTTCCTTGGTGAAAGTACGTGCAATAACGTCACGC 62028 ||||||| || |||| |||| ||| | ||| || ||||| |||||||| || Sbjct 136558 TTGATATATTTGAATTTACATC---TTTTCATGG--AAGGTACGAGCAATAACTTCCTTT 136504 Query 62029 TGCTGTTCTGACGTCAGAGAATTAAATCGGACAGCATAACCAGAAACACGAATAGTCAGC 62088 || |||| || || | | ||| |||||||| || |||||||||||||| | Sbjct 136503 TGTTGTTGTGGTGTTAATTTAACAAAATTAACAGCATATCCTGAAACACGAATAGTTAAG 136444 Query 62089 TGAGGATATTTTTCTGGATGTTGAACTGCATCTTCTAAAGTTTC---TTTAGTCAGAACA 62145 | ||||| ||||| ||||| | |||||||||||| ||||| |||| |||||| Sbjct 136443 TTTGGATAGTTTTCAGGATGAGCCATTGCATCTTCTAATGTTTCACGTTTA---AGAACA 136387 Query 62146 TTCACGTTCAGATGTTGGCCACCTT 62170 || || || ||||| ||| | |||| Sbjct 136386 TTAACATTAAGATGATGGGCTCCTT 136362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529589037280000