Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24]
1,656 sequences; 71,019,055 total letters
Query= NC_015251.1
Length=235229
Score E
Sequences producing significant alignments: (Bits) Value
seq435 107 3e-18
seq15 84.2 3e-11
>seq435
Length=48039
Score = 107 bits (118), Expect = 3e-18
Identities = 119/156 (76%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAG-AATTAAATCTAACGGC 28046
|| ||||||| || ||| || | |||||||| |||||| || ||| |||| || | ||
Sbjct 24970 AAGGTACGAGCAATAACTTCTCTTTGTTGTTGTGGGGTAAGTCTAATGAAATGTA-CAGC 25028
Query 28047 ATAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTC 28106
||||||||| || ||||| || || | ||| || ||||||||| | || ||||||||
Sbjct 25029 ATAACCAGAAACACGAATAGTTAAGTTTGGATAGTTTTCTGGATGAATCATAGCATCTTC 25088
Query 28107 TAAAGTTTCTTTATTCAAGACATTTACATTTAAATG 28142
||| || |||||| || ||||| || ||||||||
Sbjct 25089 TAATGTAGATTTATTTAATACATTAACGTTTAAATG 25124
>seq15
Length=405292
Score = 84.2 bits (92), Expect = 3e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 27988 AAAGTACGAGAAACAACATCGCGTTGTTGTTCTGGGGTTAGAGAATTAAATCTAACGGCA 28047
|| ||||||| || ||| || |||||||| ||| |||| | ||| ||||||||
Sbjct 130653 AAGGTACGAGCAATAACTTCCTTTTGTTGTTGTGGTGTTAATTTAACAAAATTAACGGCA 130712
Query 28048 TAACCAGATACTCGAATTGTCAATTGTGGGTATTTTTCTGGAAATTTAATTGCATCTTCT 28107
|| || || || ||||| || || | ||| || ||||| ||| | ||||||||||||
Sbjct 130713 TATCCTGAAACACGAATAGTTAAGTTTGGATAATTTTCAGGATAAGCCATTGCATCTTCT 130772
Query 28108 AAAGTTTCTTTATTCAAGACATTTACATTTAAATGTTGACCCCCTT 28153
|| ||||| || | ||||| ||||| | ||| || | ||||
Sbjct 130773 AATGTTTCACGTTTAAGAACATTAACATTAAGATGATGGGCTCCTT 130818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 752589221080640
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |