Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq579 159 8e-34 seq187 158 3e-33 seq97 120 7e-22 >seq579 Length=22240 Score = 159 bits (176), Expect = 8e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || || |||||||| |||||||| | |||||| | |||||||| | || Sbjct 951 TGAAGTGTAGATTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGT 1010 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| ||||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| Sbjct 1011 TTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATTTTG 1070 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || |||||||| || ||| ||| ||||| | || | || || || || Sbjct 1071 GCTTTAACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTGATAGTTTTACCAGTT 1130 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 |||||||| || || | |||||| Sbjct 1131 AAAGTTTTAACAAAGATTTGCAT 1153 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || || || ||||| || |||||||| | |||||| | |||||||| Sbjct 1172 AACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTC 1231 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | || ||||| ||||| ||||| |||||||| || || ||||| |||||||| ||||| Sbjct 1232 TAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTG 1291 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| || || || ||||| || || ||| ||| |||||||| || | ||||| Sbjct 1292 AATTTTGGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTGATAGTCTT 1351 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || | ||| ||||| || | |||||||| Sbjct 1352 ACCAGTAAGAGTCTTTACAAAGATTTGCATTT 1383 >seq187 Length=118869 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||||||||| ||||| || || ||||| || ||||| || | |||||| | |||||||| Sbjct 41172 AACAAGGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGACCATCTTC 41113 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | |||||||| || |||||||| |||||||||||||| || || ||||| || ||||| Sbjct 41112 TAATTGCTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTG 41053 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||| || || || ||||| || ||| || |||||||||| ||||| Sbjct 41052 GATCTTAGCTTTGACATTTTCGATAGTGTCGGAGGATTCGACCTCAAGGGTAATGGTCTT 40993 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | |||||| Sbjct 40992 ACCCGTAAGGGTTTTGACGAAGATTTGCAT 40963 >seq97 Length=178188 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 ||||| || ||||| || | ||| ||||| ||||||| | || ||||| ||||| || Sbjct 109207 TTTTGGATGTTGTAGTCAGAAAGGGTTCTGTCATCTTCTAATTGTTTACCGGCGAAAATT 109148 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | |||||||||||||| || || ||||| || |||||||| || | ||| || || || Sbjct 109147 AAACGTTGTTGGTCTGGTGGGATACCTTCCTTTTCTTGAATCTTGTTCTTAACATTGACA 109088 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || |||| ||| || || |||||||| | |||||||| || | ||||| ||||| Sbjct 109087 ATACTGTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGACGAA 109029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109458059574152