Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq73 98.7 1e-15 seq303 84.2 3e-11 seq151 84.2 3e-11 >seq73 Length=205935 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 98696 ATTAAAGTTGCCCAGTTGAGTGGTTACATTGCGGAACAAACTGATTATAAACACGGTGAA 98755 ||||| ||||| || | | |||||| ||||| ||||| |||| |||| | || |||||| Sbjct 183697 ATTAAGGTTGCTCAACTTACTGGTTATATTGCTGAACACACTGCTTATCACCATGGTGAA 183638 Query 98756 CAAAACCTTTGTGAAACAATAATAAAATTTGCACAAGATTTTGTGGGTACAAATAATATA 98815 |||| |||| | | || | || || |||||||||||||| |||| |||||| | Sbjct 183637 CAAAGTCTTTCTCTTGCTATTGTTAATTTAGCACAAGATTTTGTTGGTAGTAATAATGTT 183578 Query 98816 ACACTACTTGAGCCAGATGGTCAGTTTGGTAC 98847 || || | | ||| ||||||| |||||||| Sbjct 183577 CCATTATTAGTACCAAATGGTCAATTTGGTAC 183546 >seq303 Length=76964 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 182996 TACAATGCAGATTTTGATGGAGATGAAATGAATTTACATGTTCCTCAGTCGTATGAAGCT 183055 || ||||| ||||||||||| ||||||||||||||||| |||||||| || |||||| || Sbjct 73161 TATAATGCTGATTTTGATGGTGATGAAATGAATTTACACGTTCCTCAATCATATGAAACT 73220 Query 183056 ACCGCTGAA 183064 | |||||| Sbjct 73221 AGAGCTGAA 73229 >seq151 Length=136619 Score = 84.2 bits (92), Expect = 3e-11 Identities = 191/282 (68%), Gaps = 4/282 (1%) Strand=Plus/Plus Query 104865 AAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTG 104924 ||||||| || ||| | || | ||| ||| |||| || | ||| ||| |||| Sbjct 132523 AAGAATTGTTTTGGTTTATCAGGGGTGATACAGATTCAAAAATATTATCAAAAAAAGGTG 132582 Query 104925 TTAAAGTATGGAATGATAATGGTTCACGTAAGTTTTTAGATTCTTGTGGATTTCACTTTC 104984 ||||| | ||| | | |||||||| ||| | ||| | ||| ||| ||| ||| Sbjct 132583 TTAAAATTTGGGAAGGAAATGGTTCTCGTGAATTTCTTGATAAAATTGG-TTTGACTGAA 132641 Query 104985 -GAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAA 105043 || | |||||||||||||| ||||| ||||| | |||||| | ||| || || || Sbjct 132642 AGAGAGGAAGGTGATTTAGGTCCAATATATGGTTGGCAATGGCGTCATTTCGGTGCAAAA 132701 Query 105044 TATATCGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATA 105103 ||| | || ||| |||| || ||||| || |||| | ||| ||| | || | || || Sbjct 132702 TATGTAGATTGTCATACAGATTATACTGGAAAAGGAAAAGATCAACTTCGTGATGTAATT 132761 Query 105104 GAAACTATAAAAAATAACCCCGGGTGTC-GAAGAATAATTAT 105144 || | || ||||| ||| || | ||||||| ||||| Sbjct 132762 GATAAAATTGTTAATAA-TCCGACTGACAGAAGAATTATTAT 132802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658389571053760