Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq579 91.5 1e-13 >seq579 Length=22240 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| ||||| |||||||| || || ||| ||| |||| Sbjct 1153 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACTATCACTTTAGAAGTAGAATCTTCT 1094 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || |||| || || ||||| || | || ||| || Sbjct 1093 GATACCATTGAAAATGTTAAAGCCAAAATTCAA-GATAAAGAAGGTATTCCACCAGACCA 1035 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||| || || || |||||||| |||||| | ||| | | ||||| || Sbjct 1034 ACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 975 Query 28733 CATTCAAAAAGAATCTACTCTGCA 28756 ||||||||| |||||||| || || Sbjct 974 CATTCAAAAGGAATCTACACTTCA 951 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 |||||||||||| |||||||| || | || ||||| || || || ||| ||| | Sbjct 1385 AAAAATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACTATCACTCTTGAAGTTGAATC 1326 Query 28610 TTCAGAGACGGTGGCCGAT-CTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAG 28668 ||| || || | | || | |||| |||| || || ||||| || | || | Sbjct 1325 TTCTGATACTATTGAAAATGTTAAAGCCAAAATTC-AAGATAAAGAAGGTATTCCACCTG 1267 Query 28669 ATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 28728 ||||||| | ||||| || || || |||||||| |||||| | ||| | | |||| Sbjct 1266 ATCAACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATT 1207 Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 | ||||| ||||| |||||||| || ||| | || | | ||||| || || || Sbjct 1206 ACAACATCCAAAAGGAATCTACCCTTCACTTAGTTCTTCGTTTACGTGGTGGTAT 1152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425396214267624