Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq73 104 3e-17 >seq73 Length=205935 Score = 104 bits (114), Expect = 3e-17 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 13517 AAGAAGACCGATGGTGCTCGCAAGTCCAA-AATTACCGGTATTCCCAAGTTGGATGACGC 13575 || ||||| |||||| | | ||| ||| |||| | |||||||| || || ||||| || Sbjct 184609 AAAAAGACAGATGGT-CACAAAAGATCAAGAATTTCTGGTATTCCAAAATTAGATGATGC 184551 Query 13576 GAACAAGGCGGGTACGGCACAATCTGGAAAGTGTACTCTCATTGTCACAGAGGGTGATTC 13635 ||| || || |||||| ||| || | | ||| | | ||| | || || || ||||| Sbjct 184550 GAATAATGCTGGTACGAAACATTCAAAAGATTGTGTTTTAATTCTTACGGAAGGGGATTC 184491 Query 13636 GGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGATCACTACGGTGTGTT 13695 |||||| || | || || || | |||| |||||||||||| | || ||||| || Sbjct 184490 TGCTAAAGCCTTAGCTATTAGTGGATTGACTGTAGTTGGTCGTGATAATTATGGTGTATT 184431 Query 13696 CCCACTTCGCGGT-AAATGTAAGAATGTTCGGGACGCTTC 13734 ||| | || ||| |||||| | |||||||| || ||||| Sbjct 184430 TCCATTACGTGGTAAAATGTTA-AATGTTCGTGATGCTTC 184392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596557251009280