Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq579 170 4e-37 seq97 89.7 1e-12 >seq579 Length=22240 Score = 170 bits (188), Expect = 4e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGA 192368 ||||| | ||||||||| |||||||| | |||| || ||| || || || |||||||| Sbjct 927 CCACCACGAAGACGTAAGACTAAATGAAGTGTAGATTCCTTTTGA-ATGTTGTAATCAGA 985 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | || || |||| || |||||||||||||| || || | | ||||| || ||||| Sbjct 986 AAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGG 1045 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||||||||| ||||| ||| ||||| || | ||| || |||||||| Sbjct 1046 AATACCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCAATGGTATCAGAAGATTCTAC 1105 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||| || |||||||||||||| ||||||| ||| || ||||| Sbjct 1106 TTCTAAAGTGATAGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1153 Score = 145 bits (160), Expect = 2e-29 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | | ||| | ||||| || | |||| || || ||| || |||||| Sbjct 1152 ATACCACCACGTAAACGAAGAACTAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAATCA 1211 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || |||||||||||||| || || | | |||||||||||| Sbjct 1212 GAAAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCAGGT 1271 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| ||| ||||| |||| ||| || ||||| Sbjct 1272 GGAATACCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCAATAGTATCAGAAGATTCA 1331 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| ||||| || || |||||||| | || || | ||| || |||||||| Sbjct 1332 ACTTCAAGAGTGATAGTCTTACCAGTAAGAGTCTTTACAAAGATTTGCATTTT 1384 >seq97 Length=178188 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || ||||| | |||| ||||| || ||||||||||| || || ||||| | Sbjct 109202 GATGTTGTAGTCAGAAAGGGTTCTGTCATCTTCTAATTGTTTACCGGCGAAAATTAAACG 109143 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||||| || ||||| || ||||| || ||||| || || || || ||||| ||| Sbjct 109142 TTGTTGGTCTGGTGGGATACCTTCCTTTTCTTGAATCTTGTTCTTAACATTGACAATACT 109083 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA--TAAATATC 192531 || || || || || || || || || || || ||||| | ||||| | |||| | Sbjct 109082 GTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGACGAAAATCTA 109023 Query 192532 TGCATTTTATT 192542 | |||||||| Sbjct 109022 TTGATTTTATT 109012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984459111795600