Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq579 127 2e-24 seq187 123 2e-23 seq45 87.8 2e-12 seq97 84.2 2e-11 >seq579 Length=22240 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| |||| ||||||||||| || | ||||||||| | | Sbjct 1153 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACTATCACTTTAGAAGTAGAATCTTCT 1094 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| || || ||||| |||||||| || || || || ||| Sbjct 1093 GATACCATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAA 1034 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || || || ||||| | || ||| | | | || ||||| ||| Sbjct 1033 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 974 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||||||||| ||||| || || || || || Sbjct 973 ATTCAAAAGGAATCTACACTTCATTTAGTCTTACG 939 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || ||||| ||||| || || ||||| ||| | | Sbjct 1381 ATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACTATCACTCTTGAAGTTGAATCTTCT 1322 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| || || ||||| |||||||| || || || |||||| Sbjct 1321 GATACTATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCTGATCAA 1262 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || || || ||||| | || ||| | | | || ||||| ||| Sbjct 1261 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 1202 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || ||||| || | || || || || || Sbjct 1201 ATCCAAAAGGAATCTACCCTTCACTTAGTTCTTCGTTTACGTGGTGG 1155 >seq187 Length=118869 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| | ||||| || || ||||| || ||||| || || || ||| || | Sbjct 40962 GATGCAAATCTTCGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTCGAATCCTC 41021 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || ||| ||||||||||| || ||||| || || || || || Sbjct 41022 CGACACTATCGAAAATGTCAAAGCTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCA 41081 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | ||||||||||| || || | || ||| | | | || || || || Sbjct 41082 ACAACGTCTTATCTTTGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACAA 41141 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || || ||| | || | || || || || || || Sbjct 41142 CATCCAAAAGGAATCTACTCTCCACCTTGTTCTTCGTTTACGTGGTGGTGG 41192 >seq45 Length=243278 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 24708 AGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACA 24767 |||| ||| | || || || ||||| || ||||| || || || || ||| | |||||| Sbjct 63636 AGATTTTTGTAAAGACCCTTACCGGAAAGACTATCACCCTTGAGGTTGAATCTTCCGACA 63577 Query 24768 CAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAAC 24827 | | | ||||| | ||||||||||| || ||||| || || || |||||||||| Sbjct 63576 GCATTGTTAATGTAAAGAACAAGATCCAAGAAAAGGAAGGTATTCCACCAGATCAACAAC 63517 Query 24828 GTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTC 24887 |||| ||||| || || || || | || ||| | | | || || || ||||| | Sbjct 63516 GTTTAATCTTCGCTGGTAAGCAATTAGAAGATGACCGTACTCTCTCTGACTACAACATCC 63457 Query 24888 AAAAGG 24893 |||||| Sbjct 63456 AAAAGG 63451 >seq97 Length=178188 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 24708 AGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACA 24767 |||| || | ||||| || || || || ||||| || || || || || | |||||| Sbjct 109024 AGATTTTCGTCAAAACCCTTACTGGAAAGACTATAACCCTTGAGGTTGAGTCTTCCGACA 109083 Query 24768 CAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAAC 24827 | | | || || | ||||| ||||| || ||||| || || || || ||||||| Sbjct 109084 GTATTGTCAATGTTAAGAACAAGATTCAAGAAAAGGAAGGTATCCCACCAGACCAACAAC 109143 Query 24828 GTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTC 24887 |||| || || ||||| ||||| | || ||| |||| | | || || || ||||| | Sbjct 109144 GTTTAATTTTCGCCGGTAAACAATTAGAAGATGACAGAACCCTTTCTGACTACAACATCC 109203 Query 24888 AAAAGG 24893 |||||| Sbjct 109204 AAAAGG 109209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449888287119680