Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq16 107 6e-18 seq120 84.2 7e-11 >seq16 Length=402063 Score = 107 bits (118), Expect = 6e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 46569 GGTaaaaaaaCAATTTTGTTTTTAGACGAAATACATCGTTTCAATAAAGGACAGCAAGAT 46628 || |||||| |||| || ||| |||| ||||| ||| | || |||| ||| |||||| Sbjct 324763 GGAAAAAAAGCAATATTATTTATAGATGAAATTCATAGATTTAATAGGTTACAACAAGAT 324822 Query 46629 TCGTTATTACCTTATGTTGAAGATGGAACAATTACGTTAATTGGTGCAACAACTGAAAAT 46688 || |||||| | | |||||| || || |||| ||||||||||||||||| |||||| Sbjct 324823 TCATTATTATCATGGGTTGAAAGAGGTGCATTTACTTTAATTGGTGCAACAACAGAAAAT 324882 Query 46689 CCATTTTTTGAAATTAACGGAGCTTTAATTTCTAGATCAACAATATTCAAGTTGGAACCA 46748 || | |||| || | || ||||||| | | | | | | |||| |||| || Sbjct 324883 CCCTCTTTTAAATTAAATTCAGCTTTATTAAGTCGTTGTAGAGTATTTCAGTTAAAAAAG 324942 Query 46749 TTAAGTAAAAAAGATAT 46765 ||||||||| ||| ||| Sbjct 324943 TTAAGTAAAGAAGCTAT 324959 >seq120 Length=158761 Score = 84.2 bits (92), Expect = 7e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 188763 TAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGC 188822 ||| || ||||||||||| || |||||| | |||||||| ||| | | ||||| | || Sbjct 81182 TAACGTACTTTTAGTTGGACCAACTGGTACTGGTAAAACTTTAATATCAAAAACAATTGC 81241 Query 188823 TGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTA 188882 ||| || ||| |||| || |||| |||||| || | || ||| |||| ||||| Sbjct 81242 TGAAATATTAGATGTTCCATATTCTATTAATGATGCTACACCATTTACACAAGCCGGTTA 81301 Query 188883 TGTAGGTGAAGATG 188896 || |||||||||| Sbjct 81302 CGTTGGTGAAGATG 81315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591876623641088