Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_024124.2 Length=169148 Score E Sequences producing significant alignments: (Bits) Value seq38 95.1 1e-14 seq11 86.0 7e-12 seq374 82.4 8e-11 >seq38 Length=269233 Score = 95.1 bits (104), Expect = 1e-14 Identities = 122/167 (73%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 |||| ||| || || |||||||||||||| ||||||||||| |||||||| | Sbjct 180082 GGTGCTCACCATCTTAACGTTAACGTTCTCAAGCGTGAAACTCTTGAAGATGCTATGGCT 180023 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTT--- 108538 || || ||||| ||||| | || || || ||||| || |||||||| ||| |||| Sbjct 180022 CACCCAGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCCGTTAACTTTGTA 179963 Query 108539 AACTCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTT 108585 || | | |||||| |||| || || ||||| ||||||||||| Sbjct 179962 AAGT---TAACTCCACAACAACAAAAGGAAGTTATTGCTCGTACCTT 179919 >seq11 Length=440999 Score = 86.0 bits (94), Expect = 7e-12 Identities = 120/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 |||| ||| || || || ||||||||||| ||||||||| | |||||||| | Sbjct 180907 GGTGCTCATCATCTTAATGTTAACGTTCTTAAGCGTGAAACTTTAGAAGATGCTATGGCT 180966 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCT---TT 108538 ||||| ||||| ||||| | || || || ||||| || |||||||| ||| || || Sbjct 180967 CATCCAGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTTGTT 181026 Query 108539 AACTCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTT 108585 || | | ||||||| || || || ||||| ||||||||||| Sbjct 181027 AAGT---TAACTCCAGCTCAACAAAAGGAAGTTATTGCTCGTACCTT 181070 >seq374 Length=59602 Score = 82.4 bits (90), Expect = 8e-11 Identities = 119/167 (71%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 108422 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 108481 |||| ||| || || |||||||||||||| ||||||||| | |||||||| | Sbjct 33623 GGTGCTCACCATCTCAACGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCT 33682 Query 108482 CATCCGGAAAAATATCCTCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTT--- 108538 ||||| ||||| ||||| | || ||||| ||||| || ||||| || || |||| Sbjct 33683 CATCCAGAAAACTATCCAAACCTTACCATTCGTGTCTCTGGTTACGCTGTCAACTTTGTA 33742 Query 108539 AACTCTCTGACTCCAGAACAGCAGCGCGACGTTATCGCTCGTACCTT 108585 || | | ||||| |||| || || ||||| || |||||||| Sbjct 33743 AAGT---TAACTCCTCAACAACAAAAGGAAGTTATTGCCCGTACCTT 33786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541134398286080