Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq579 113 4e-20 >seq579 Length=22240 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||||||||| || ||||| || || || || | ||| |||| | Sbjct 1153 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACTATCACTTTAGAAGTAGAATCTTCT 1094 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | || ||| |||||| || |||||||| | || || ||| Sbjct 1093 GATACCATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAA 1034 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| || || ||||||||||||||| | ||| | ||||||||| Sbjct 1033 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 974 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || ||||| ||||||||||| |||||||| || Sbjct 973 ATTCAAAAGGAATCTACACTTCATTTAGTCTT 942 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 106256 AAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACC 106315 |||||||||||| ||||| || || | ||||| ||||| || || | ||| ||| | Sbjct 1385 AAAAATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACTATCACTCTTGAAGTTGAATC 1326 Query 106316 CGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGA 106375 ||| || ||| | || ||| |||||| || |||||||| | || ||| Sbjct 1325 TTCTGATACTATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCTGA 1266 Query 106376 TCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTA 106435 ||||||| | ||||||| || || ||||||||||||||| | ||| | ||||| Sbjct 1265 TCAACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTA 1206 Query 106436 CAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||||| ||||| |||||||| || || ||||| | | ||||| || || Sbjct 1205 CAACATCCAAAAGGAATCTACCCTTCACTTAGTTCTTCGTTTACGTGGTGG 1155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402321479982848