Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq579 127 2e-24 seq187 116 4e-21 seq97 84.2 2e-11 >seq579 Length=22240 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | || || || || | || || || |||||||||||||||||||| || Sbjct 924 TTTCCACCACGAAGACGTAAGACTAAATGAAGTGTAGATTCCTTTTGAATGTTGTAATCA 983 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || || || || || | ||||| || || ||||| | ||| || || || || Sbjct 984 GAAAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGT 1043 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || |||||||| ||||||||||| ||| || || | || || || ||||| Sbjct 1044 GGAATACCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCAATGGTATCAGAAGATTCT 1103 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || |||||||| |||||||||||||| || |||||||| Sbjct 1104 ACTTCTAAAGTGATAGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 1153 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| |||||||| || || || || || || | || Sbjct 1178 GTGAAGGGTAGATTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 1237 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || ||||| | ||| || ||||| || || || |||||||| ||||||||||| Sbjct 1238 TTTACCAGCGAAAATAAGACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTT 1297 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| || || | || || || ||||| || || ||||| || || ||||| || Sbjct 1298 GGCTTTAACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTGATAGTCTTACCAGT 1357 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725 | ||| || || || ||||||||||| | ||| || Sbjct 1358 AAGAGTCTTTACAAAGATTTGCATTTTTTATTTATT 1393 >seq187 Length=118869 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || ||||||||||| ||||||||||| || || || || || Sbjct 41171 ACAAGGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGACCATCTTCT 41112 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 | || || || ||||| || | ||| || || || || || || ||||| || ||||| Sbjct 41111 AATTGCTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGG 41052 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| || | |||||||| ||||| || || || |||||||| ||| Sbjct 41051 ATCTTAGCTTTGACATTTTCGATAGTGTCGGAGGATTCGACCTCAAGGGTAATGGTCTTA 40992 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||||| ||||| |||||||| Sbjct 40991 CCCGTAAGGGTTTTGACGAAGATTTGCAT 40963 >seq97 Length=178188 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTG-TGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||||| ||||||||||| || ||| || | || || | ||||| || || ||| Sbjct 109209 CCTTTTGGATGTTGTAGTCAGAAAGGGTTCTGTCA-TCTTCTAATTGTTTACCGGCGAAA 109151 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 || ||||| || || || || || || ||||| ||||||||||| || | || || | Sbjct 109150 ATTAAACGTTGTTGGTCTGGTGGGATACCTTCCTTTTCTTGAATCTTGTTCTTAACATTG 109091 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 | | ||||||| || || || || || || || || || || || | ||||| ||| Sbjct 109090 ACAATACTGTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGACG 109031 Query 134703 AAAAT---TTGCATTTTGTTT 134720 ||||| ||| ||||| ||| Sbjct 109030 AAAATCTATTG-ATTTTATTT 109011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505387938253120