Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_027353.1 Length=167063 Score E Sequences producing significant alignments: (Bits) Value seq38 93.3 5e-14 seq374 84.2 2e-11 seq11 84.2 2e-11 >seq38 Length=269233 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/168 (73%), Gaps = 6/168 (4%) Strand=Plus/Plus Query 61423 GAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTT---AAAGCGAAC 61479 |||||||||||| ||||| || || |||| ||||| | | || |||| ||| Sbjct 179918 GAAGGTACGAGCAATAACTTCCTTTTGTTGTTGTGGAGTTA---ACTTTACAAAGTTAAC 179974 Query 61480 TGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATC 61539 |||||||| || ||||| || || || | ||||| ||||| || || | ||||| Sbjct 179975 GGCATAACCAGAAACACGAATAGTAAGGTTTGGATAGTTTTCTGGGTGAGCCATAGCATC 180034 Query 61540 TTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACC 61587 ||| ||||||||||| |||||||||||||| || || ||| |||| Sbjct 180035 TTCAAGAGTTTCACGCTTGAGAACGTTAACGTTAAGATGGTGAGCACC 180082 >seq374 Length=59602 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/168 (71%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 61423 GAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTT---AAAGCGAAC 61479 ||||||||| || ||||| || || |||| ||||| | | || |||| || Sbjct 33787 GAAGGTACGGGCAATAACTTCCTTTTGTTGTTGAGGAGTTA---ACTTTACAAAGTTGAC 33731 Query 61480 TGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATC 61539 || ||||| || ||||| ||||| || | ||||| ||||| ||||| | ||||| Sbjct 33730 AGCGTAACCAGAGACACGAATGGTAAGGTTTGGATAGTTTTCTGGATGAGCCATAGCATC 33671 Query 61540 TTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACC 61587 ||| | ||||||||| |||||||||||||| || || ||| |||| Sbjct 33670 TTCTAAAGTTTCACGTTTAAGAACGTTAACGTTGAGATGGTGAGCACC 33623 >seq11 Length=440999 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/168 (71%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 61423 GAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAA---AGCGAAC 61479 |||||||||||| ||||| || || || | ||||| | | |||| || ||| Sbjct 181071 GAAGGTACGAGCAATAACTTCCTTTTGTTGAGCTGGAGTTA---ACTTAACAAAGTTAAC 181015 Query 61480 TGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATC 61539 |||||||| || ||||| || || || | ||||| ||||| ||||| | ||||| Sbjct 181014 AGCATAACCAGAAACACGAATAGTAAGGTTTGGATAGTTTTCTGGATGAGCCATAGCATC 180955 Query 61540 TTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACC 61587 ||| | ||||||||| ||||||||||| || || || ||| |||| Sbjct 180954 TTCTAAAGTTTCACGCTTAAGAACGTTAACATTAAGATGATGAGCACC 180907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534462536396480