Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq579 111 1e-19 seq187 89.7 4e-13 >seq579 Length=22240 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || || ||||| | ||||| || |||||||| ||||| || | | || | Sbjct 939 CGTAAGACTAAATGAAGTGTAGATTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACCA 998 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| | |||||||| ||| |||| ||||| ||||| || || || | ||| |||||| Sbjct 999 TCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTA 1058 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || || ||| ||| | |||| | || || | | ||| ||||||| ||| ||| Sbjct 1059 TCTTGAATTTTGGCTTTAACATTTTCAATGGTATCAGAAGATTCTACTTCTAAAGTGATA 1118 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || | |||||| ||||||||||||||| Sbjct 1119 GTTTTACCAGTTAAAGTTTTAACAAAGATTTGCATA 1154 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || ||||| || ||||| || | | || | ||||| | |||||||| Sbjct 1185 GTAGATTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCA 1244 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||| ||||| |||||||| || || | ||| |||||||| || ||| ||| Sbjct 1245 GCGAAAATAAGACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTA 1304 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | ||| || | | ||||||||| ||||| |||| || || || ||||| Sbjct 1305 ACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTGATAGTCTTACCAGTAAGAGTC 1364 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||||||||| Sbjct 1365 TTTACAAAGATTTGCAT 1381 >seq187 Length=118869 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || ||||| || |||||||| | | || | ||||| | || |||||| Sbjct 41159 GTAGATTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGACCATCTTCTAATTGCTTACCG 41100 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || ||||| ||||| || || || | ||| || ||||| |||||| ||| Sbjct 41099 GCAAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTTAGCTTTG 41040 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | |||| | |||||| | || ||| || || || || || | || ||||| || ||| Sbjct 41039 ACATTTTCGATAGTGTCGGAGGATTCGACCTCAAGGGTAATGGTCTTACCCGTAAGGGTT 40980 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||||||||| Sbjct 40979 TTGACGAAGATTTGCAT 40963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424925823761472