Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq73 109 7e-19 >seq73 Length=205935 Score = 109 bits (120), Expect = 7e-19 Identities = 258/378 (68%), Gaps = 14/378 (4%) Strand=Plus/Plus Query 182520 CCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCG- 182578 ||||| |||||||||||||| |||| ||| ||||| ||||||| | ||||||| | Sbjct 184239 CCCTTAATGTGAGAACCATCTGTATCTTGATCCGTCATGATCATAATATGACCATATCTT 184298 Query 182579 -AAGT-TCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTTGAGA 182636 || | |||| | | | || |||| || ||||| | |||||| || | || | Sbjct 184299 AAACTATCAGTA---TTTGTATAAACTTTACCATGTTGTAAACCAAGAATTTGTTTAATT 184355 Query 182637 TCATTGAACTCCTGGTTTGATG--TAAGCTGTGCCACCGAAGCGTCCCGAACATTCTTAC 182694 || | |||| | | || || ||| | ||||| || |||||||| | || Sbjct 184356 GCACT-AACTTCAGCATT-ATCCATAATAGATTTATGTGAAGCATCACGAACATT-TAAC 184412 Query 182695 ATTT-ACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCA 182753 |||| ||| || | ||| || ||||| || | |||||||||||| |||| | || | Sbjct 184413 ATTTTACCACGTAATGGAAATACACCATAATTATCACGACCAACTACAGTCAATCCACTA 184472 Query 182754 ACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGT 182813 | || | || ||| || ||||| || ||||| | ||| | | ||| | | || ||| Sbjct 184473 ATAGCTAAGGCTTTAGCAGAATCCCCTTCCGTAAGAATTAAAACACAATCTTTTGAATGT 184532 Query 182814 GCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGGTAATT-TTGGACTTGCG 182872 |||||| || || ||||| ||||| || || |||||||| | |||| ||| ||| | Sbjct 184533 TTCGTACCAGCATTATTCGCATCATCTAATTTTGGAATACCAGAAATTCTTGATCTTTTG 184592 Query 182873 AGCACCATCGGTCTTCTT 182890 | |||||| ||||| || Sbjct 184593 TG-ACCATCTGTCTTTTT 184609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628018999737600