Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq73 86.0 8e-12 >seq73 Length=205935 Score = 86.0 bits (94), Expect = 8e-12 Identities = 256/383 (67%), Gaps = 24/383 (6%) Strand=Plus/Plus Query 179779 CCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCG- 179837 ||||||||||| |||||||| |||| ||||||||| ||||||| ||||||| | Sbjct 184239 CCCTTAATGTGAGAACCATCTGTATCTTGATCCGTCATGATCATAATATGACCATATCTT 184298 Query 179838 AAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATC 179897 || || | || | |||| | ||||| ||||| | ||| |||| || || | Sbjct 184299 AAACTATCAGT-ATTTGTATAAACTTTACCATGTTGTAAACC-AAGAATTTGTTTA---- 184352 Query 179898 ATTGAACT--CTTG-GTTTGATGT------GAGTTGCGCCACTGAAGCATCTCGGACATT 179948 |||| ||| ||| | | || || || | ||||||||| || ||||| Sbjct 184353 ATTGCACTAACTTCAGCATTATCCATAATAGATTTATG----TGAAGCATCACGAACATT 184408 Query 179949 TTTACACTTC-CCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGAC 180007 | ||| || ||||| | || || ||||| || | |||||||||||| |||| | | Sbjct 184409 TA-ACATTTTACCACGTAATGGAAATACACCATAATTATCACGACCAACTACAGTCAATC 184467 Query 180008 CAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAG 180067 || || || | || || || ||||| || ||||| | || | ||| | | | Sbjct 184468 CACTAATAGCTAAGGCTTTAGCAGAATCCCCTTCCGTAAGAATTAAAACACAATCTTTTG 184527 Query 180068 ATTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAATACCAGTAATT-TTGGAC 180126 | ||| ||| || || || ||||| || || || || |||||||||| |||| ||| | Sbjct 184528 AATGTTTCGTACCAGCATTATTCGCATCATCTAATTTTGGAATACCAGAAATTCTTGATC 184587 Query 180127 TTACGAGCGCCATCTGTCTTCTT 180149 || | | ||||||||||| || Sbjct 184588 TTTTGTG-ACCATCTGTCTTTTT 184609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618422398391360