Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq73 131 8e-26 >seq73 Length=205935 Score = 131 bits (144), Expect = 8e-26 Identities = 377/574 (66%), Gaps = 11/574 (2%) Strand=Plus/Plus Query 64882 AGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGG 64941 ||||||| | || || |||||||| | | |||||||| | || ||| || | |||||| Sbjct 183335 AGTACTATAACCAGTACCAATACCTTCAGCACCATTTATAAGAACCATGGGTAAAATTGG 183394 Query 64942 TGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAA-AATGGCAT 65000 ||| | | || |||| || |||||||||||| ||||| ||||| ||| || Sbjct 183395 AATATACCATTTTGGTTCAATCATTTGACCATCATCATTTAAATA-TTCAAGAATATTAT 183453 Query 65001 CATCCTCTTTTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATCTTT 65060 |||| ||| ||| || | | ||| | |||| |||||||| ||||||| | Sbjct 183454 CATCAGATTTCTTAAAAATTAATCTAGTAACTTTAGCTAATTGAGTGAAAATATAACGAG 183513 Query 65061 CGGATGCGTGGTCTTGTCCAGTTCGT---CGTGTTCCAAACTGACCATTTGGCATTAATA 65117 | ||| || | |||| | || ||||| ||||| ||||||||||| | ||||| Sbjct 183514 CACTGGCGGCATCCTTTCCACCTTGTAAACGTGTACCAAATTGACCATTTGGTACTAATA 183573 Query 65118 AATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAAAC 65177 | || ||| || ||||| ||||| || || | | ||| || | | || Sbjct 183574 ATGGAACATTATTACTACCAACAAAATCTTGTGCTAAATTAACAATAGCAAGAGAAAGAC 183633 Query 65178 TCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTT 65237 | |||||| || ||||| | | ||||||| | ||| ||| ||| ||||||||| | Sbjct 183634 TTTGTTCACCATGGTGATAAGCAGTGTGTTCAGCAATATAACCAGTAAGTTGAGCAACCT 183693 Query 65238 TTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAATACAATATTTTCCGTAAACTAATTT 65297 | ||||| | |||||||| ||||||| | ||||| ||||| | | || | | Sbjct 183694 TAATTTCATTGGTTAAATTTCTTTTAAAACAACCATACATAATTTTTCTTTGACCAGGCT 183753 Query 65298 TCAATCCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGA 65357 | || ||||| | ||| ||||| | | ||| | || || || || | Sbjct 183754 TAAAACCATCAACTAATGATGGAATAGAACGAATAACATCTGCCATAGAAAATTGAATTA 183813 Query 65358 ATTCTTTGTTAATAAATTCTTCATATGAAACACTCGTATTATCTG---TATTCAAATAAC 65414 | ||||| ||||||||||| | | ||| ||| | ||| | | | ||| || |||| Sbjct 183814 ACTCTTTATTAATAAATTCATTA-ATG--ACAATTTTATCAACAGAATTATCCATATAAA 183870 Query 65415 TATCGCGATTATATTTTTCTAACCATTCTTTTCT 65448 |||| | |||| | | |||||| |||||||| Sbjct 183871 TATCTGGTGTATAATCCTTTAACCAATCTTTTCT 183904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235675243388400