Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq73 89.7 6e-13 >seq73 Length=205935 Score = 89.7 bits (98), Expect = 6e-13 Identities = 249/375 (66%), Gaps = 8/375 (2%) Strand=Plus/Plus Query 118016 CCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTACCGT 118075 ||||| || || ||||| || ||| ||| ||||||||||| | | || || | | Sbjct 184239 CCCTTAATGTGAGAACCATCTGTATCTTGATCCGTCATGATCATAATATGACCATATCTT 184298 Query 118076 AAATCTCTCAGGGAGT-TATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAAGGTT 118134 ||| || |||| | ||||||| ||||||||||| | || || || | ||||| || Sbjct 184299 AAA-CTATCAGTATTTGTATAAACTTTACCATGTTGTAAACCAAGAATTTGTTTAA--TT 184355 Query 118135 GGA--AAATTCCTCATTTTCCGTCACCTGTTTTATG-GTGGCGTCCCGAACGTTGCGCGG 118191 | | || ||| |||| ||| | | | |||||| | || || ||||| || | Sbjct 184356 GCACTAACTTCAGCATTATCCAT-AATAGATTTATGTGAAGCATCACGAACATTTAACAT 184414 Query 118192 CTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCACAACGCTCAAGCCGGCAAT 118251 ||||| || | |||||| || ||| | || ||||| || || || |||| || ||| Sbjct 184415 TTTACCACGTAATGGAAATACACCATAATTATCACGACCAACTACAGTCAATCCACTAAT 184474 Query 118252 AGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTCGGTGCTGCGATG 118311 ||| | ||| || || || || || || |||| ||| | | || || | | | Sbjct 184475 AGCTAAGGCTTTAGCAGAATCCCCTTCCGTAAGAATTAAAACACAATCTTTTGAATGTTT 184534 Query 118312 AGTACCGGCCCAATTAGCATCATCCAGCTTCGGAACGCCCGTAATGCGCGACTTTTTGGA 118371 ||||| || ||| |||||||| | || |||| || | ||| | || ||||| Sbjct 184535 CGTACCAGCATTATTCGCATCATCTAATTTTGGAATACCAGAAATTCTTGATCTTTTGTG 184594 Query 118372 CCCATCTGTCTTCTT 118386 ||||||||||| || Sbjct 184595 ACCATCTGTCTTTTT 184609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547204672628800