Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq15 89.7 6e-13 seq38 87.8 2e-12 seq11 87.8 2e-12 >seq15 Length=405292 Score = 89.7 bits (98), Expect = 6e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | || ||||||||||| |||||||| || |||||||| | |||||||| | Sbjct 136362 AAGGAGCCCATCATCTTAATGTTAATGTTCTTAAACGTGAAACATTAGAAGATGCAATGG 136421 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTTCGTTTT 125605 ||||||||||| ||||| | | || ||||||||||| || ||||| ||| |||| Sbjct 136422 CTCATCCTGAAAACTATCCAAACTTAACTATTCGTGTTTCAGGATATGCTGTTAATTTT 136480 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | || ||||||||||| |||||||| || |||||||| | |||||||| | Sbjct 130818 AAGGAGCCCATCATCTTAATGTTAATGTTCTTAAACGTGAAACATTAGAAGATGCAATGG 130759 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTTCGTTTT 125605 |||||||||| ||||| | | || ||||||||||| || ||||| ||| |||| Sbjct 130758 CTTATCCTGAAAATTATCCAAACTTAACTATTCGTGTTTCAGGATATGCCGTTAATTTT 130700 >seq38 Length=269233 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| |||||||| || || ||||| || |||||||| ||| ||||||| | || || Sbjct 180077 TCACCATCTTAACGTTAACGTTCTCAAGCGTGAAACTCTTGAAGATGCTATGGCTCACCC 180018 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 180017 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCCGTT 179972 >seq11 Length=440999 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| || ||||| || |||||||| | ||||||| | ||||| Sbjct 180912 TCATCATCTTAATGTTAACGTTCTTAAGCGTGAAACTTTAGAAGATGCTATGGCTCATCC 180971 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 180972 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTT 181017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582723937364800