Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq38 87.8 2e-12 >seq38 Length=269233 Score = 87.8 bits (96), Expect = 2e-12 Identities = 121/168 (72%), Gaps = 6/168 (4%) Strand=Plus/Minus Query 101922 GGTGGTCAACACCTGAACGTTAACGTTTTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 101981 |||| ||| || || |||||||||||| | ||||||||||| |||||||| | Sbjct 180082 GGTGCTCACCATCTTAACGTTAACGTTCTCAAGCGTGAAACTCTTGAAGATGCTATGGCT 180023 Query 101982 CATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTT--- 102038 || || ||||| ||||| | || || || ||||| || |||||||| ||| |||| Sbjct 180022 CACCCAGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCCGTTAACTTTGTA 179963 Query 102039 AACTCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTC 102086 || | | ||||| |||| || || ||||| |||||||||||| Sbjct 179962 AAGT---TAACTCCACAACAACAAAAGGAAGTTATTGCTCGTACCTTC 179918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534657732355840