Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq38 95.1 1e-14 seq374 91.5 2e-13 seq11 91.5 2e-13 >seq38 Length=269233 Score = 95.1 bits (104), Expect = 1e-14 Identities = 119/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| |||||||||||||| ||||||||||| |||||||| | || || Sbjct 180077 TCACCATCTTAACGTTAACGTTCTCAAGCGTGAAACTCTTGAAGATGCTATGGCTCACCC 180018 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCTTT---AACTC 123238 |||||| ||||| | || || || ||||| ||||||||||| ||| |||| || | Sbjct 180017 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCCGTTAACTTTGTAAAGT- 179959 Query 123239 TCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTT 123280 | ||||| |||| || || ||||| ||||| ||||| Sbjct 179958 --TAACTCCACAACAACAAAAGGAAGTTATTGCTCGTACCTT 179919 >seq374 Length=59602 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| |||||||||||||| ||||||||| |||||||||| | ||||| Sbjct 33628 TCACCATCTCAACGTTAACGTTCTTAAACGTGAAACTTTAGAAGATGCTATGGCTCATCC 33687 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGT 123226 |||||| ||||| | || ||||| ||||| |||||||| || || Sbjct 33688 AGAAAACTATCCAAACCTTACCATTCGTGTCTCTGGTTACGCTGT 33732 >seq11 Length=440999 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 123122 TCAACATCTGAACGTTAACGTTCTGCGTCGTGAAACTCTAGAAGATGCAGTTAAGCATCC 123181 ||| ||||| || ||||||||||| ||||||||| |||||||||| | ||||| Sbjct 180912 TCATCATCTTAATGTTAACGTTCTTAAGCGTGAAACTTTAGAAGATGCTATGGCTCATCC 180971 Query 123182 AGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGTTATGCAGTTCGCT---TTAACTC 123238 |||||| ||||| | || || || ||||| ||||||||||| ||| || |||| | Sbjct 180972 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTTAACTTTGTTAAGT- 181030 Query 123239 TCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGCACCTT 123280 | ||||| | || || || ||||| ||||| ||||| Sbjct 181031 --TAACTCCAGCTCAACAAAAGGAAGTTATTGCTCGTACCTT 181070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539928023258560