Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq579 122 6e-23 seq45 96.9 2e-15 >seq579 Length=22240 Score = 122 bits (134), Expect = 6e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| | || || ||||| |||||| | ||||| || || | Sbjct 1153 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACTATCACTTTAGAAGTAGAATCTTCT 1094 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||||| | ||||| | |||| || || ||||||||| | || ||||| || Sbjct 1093 GATACCATTGAAAATGTTAAAGCCAAAA-TTCAAGATAAAGAAGGTATTCCACCAGACCA 1035 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || || || |||||| | ||||| | || ||| | |||||||| Sbjct 1034 ACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 975 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||| ||||| || || ||| | |||||||| ||| Sbjct 974 CATTCAAAAGGAATCTACACTTCATTTAGTCTTA 941 Score = 122 bits (134), Expect = 6e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| || || || || || || || || || || |||||||| |||||||| || Sbjct 1384 AAAATGCAAATCTTTGTAAAGACTCTTACTGGTAAGACTATCACTCTTGAAGTTGAATCT 1325 Query 23668 ACGGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | || ||| |||||| | ||||| | |||| || || ||||||||| | || || || Sbjct 1324 TCTGATACTATTGAAAATGTTAAAGCCAAAA-TTCAAGATAAAGAAGGTATTCCACCTGA 1266 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| ||| | || || || || |||||| | ||||| | || ||| | ||||| Sbjct 1265 TCAACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTA 1206 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||||| ||||| || || || | || |||||| Sbjct 1205 CAACATCCAAAAGGAATCTACCCTTCACTTAGTT 1172 >seq45 Length=243278 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666 |||||| ||||||| || || ||||| || ||||| || ||||| || || ||||| || Sbjct 63642 TAAAAT--AGATTTTTGTAAAGACCCTTACCGGAAAGACTATCACCCTTGAGGTTGAATC 63585 Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||| ||| | |||| | || || || || |||||| | || ||||| Sbjct 63584 TTCCGACAGCATTGTTAATGTAAAGAACAAGATCCAAGAAAAGGAAGGTATTCCACCAGA 63525 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 |||||| |||||||| || || || || ||| | ||||| || || ||| | || || Sbjct 63524 TCAACAACGTTTAATCTTCGCTGGTAAGCAATTAGAAGATGACCGTACTCTCTCTGACTA 63465 Query 23787 CAACATACAAAA 23798 |||||| ||||| Sbjct 63464 CAACATCCAAAA 63453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002778121248