Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_031085.1 Length=166634 Score E Sequences producing significant alignments: (Bits) Value seq38 82.4 8e-11 >seq38 Length=269233 Score = 82.4 bits (90), Expect = 8e-11 Identities = 119/167 (71%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 62761 AAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTT---AAAGCGAACT 62817 ||||||||||| ||||| || || |||| ||||| | | || |||| ||| Sbjct 179919 AAGGTACGAGCAATAACTTCCTTTTGTTGTTGTGGAGTTA---ACTTTACAAAGTTAACG 179975 Query 62818 GCATATCCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 62877 ||||| || || ||||| || || || | ||||| ||||| || || | |||||| Sbjct 179976 GCATAACCAGAAACACGAATAGTAAGGTTTGGATAGTTTTCTGGGTGAGCCATAGCATCT 180035 Query 62878 TCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACC 62924 || ||||||||||| |||||||| ||||| || || ||| |||| Sbjct 180036 TCAAGAGTTTCACGCTTGAGAACGTTAACGTTAAGATGGTGAGCACC 180082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533089764813440