Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Piromyces_20sp._20E2_20[genbank_20GCA_5F002157105.1_202017-05-24] 1,656 sequences; 71,019,055 total letters Query= NC_031090.1 Length=169621 Score E Sequences producing significant alignments: (Bits) Value seq38 86.0 7e-12 seq34 84.2 2e-11 seq1391 82.4 8e-11 >seq38 Length=269233 Score = 86.0 bits (94), Expect = 7e-12 Identities = 120/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 142541 GGTGGTCAACACCTGAACGTTAATGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 142600 |||| ||| || || |||||||| ||||| ||||||||||| |||||||| | Sbjct 180082 GGTGCTCACCATCTTAACGTTAACGTTCTCAAGCGTGAAACTCTTGAAGATGCTATGGCT 180023 Query 142601 CATCCAGAAAAATATCCGCAGTTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTT--- 142657 || |||||||| ||||| | | || || ||||| || |||||||| ||| |||| Sbjct 180022 CACCCAGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCCGTTAACTTTGTA 179963 Query 142658 AACTCTCTGACTCCGGAACAGCAGCGTGACGTTATCGCTCGTACCTT 142704 || | | ||||| |||| || || ||||| ||||||||||| Sbjct 179962 AAGT---TAACTCCACAACAACAAAAGGAAGTTATTGCTCGTACCTT 179919 >seq34 Length=281989 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 142550 CACCTGAACGTTAATGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCAGAA 142609 ||| | || ||||||||| | ||||||||| | |||||||| | | ||||||||| Sbjct 14328 CACTTAAATGTTAATGTTTTAGTTCGTGAAACATTAGAAGATGCCATGATTCATCCAGAA 14387 Query 142610 AAATATCCGCAGTTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTA 142658 || ||||| | || || || ||||| ||||| |||||||||| ||||| Sbjct 14388 AATTATCCAAACTTAACTATTCGTGTTTCCGGATATGCAGTTCACTTTA 14436 >seq1391 Length=2366 Score = 82.4 bits (90), Expect = 8e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 142556 AACGTTAATGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCAGAAAAATAT 142615 || ||||||||| | ||||||||| | |||||||| | | ||||||||||| ||| Sbjct 1968 AATGTTAATGTTTTAGTTCGTGAAACATTAGAAGATGCCATGATTCATCCAGAAAATTAT 2027 Query 142616 CCGCAGTTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTA 142658 || | || || || ||||| ||||| |||||||||| ||||| Sbjct 2028 CCAAATTTAACTATTCGTGTTTCCGGATATGCAGTTCACTTTA 2070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542647966954560