Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq335 95.1 2e-14 >seq335 Length=386496 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| | || || || || || ||| | ||| ||||| | Sbjct 39210 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATTACTCTTGAGGTTGAATCCTCC 39151 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || || || || || || ||||| || |||||||| || Sbjct 39150 GATACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCTGACCAG 39091 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || ||||| ||||| || || || ||| | ||||| | || || || Sbjct 39090 CAGCGTTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGCCGAACCCTCTCTGACTACAAC 39031 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| ||| | || | ||||| ||| | || |||||||| Sbjct 39030 ATTCAAAAAGAATCTACTCTCCACCTTGTTTTGCGTCTCCGTGGTGGTAT 38981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755451873321600