Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq157 89.7 5e-13 >seq157 Length=558770 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 ||| ||||| ||| || |||||||| ||||| ||| || || || || ||||| | Sbjct 322567 ACAAGCAAAGTCAGTGTGGAGGCCCTCGTCTCTGGAAATGAGCTCATTAGAGAATGTAAG 322626 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 ||||||||||| || || || || | ||| || || | ||| || || || || ||||| Sbjct 322627 GCCTGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGAACCAGAGAAGAA 322686 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14382 |||||||| || | || || || | | |||||| | || || | |||| || Sbjct 322687 AATTCCCTCCACGACGGCGAAAGCAACAAGCCGTTCTGCGAAGGAGGAAGACTTGTCAGA 322746 Query 14383 TATCCATTTTCTAGCCCATTCAGAtttttttttAATA 14419 ||||| || |||||| || | || ||| ||||| Sbjct 322747 GATCCACTTGAGAGCCCAATCGGCCTTCTTTCTAATA 322783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482342965187160