Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq157 159 7e-34 >seq157 Length=558770 Score = 159 bits (176), Expect = 7e-34 Identities = 305/443 (69%), Gaps = 10/443 (2%) Strand=Plus/Minus Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962 || || |||| ||||||| || || | || || ||||| ||||| |||| | || Sbjct 322728 TTCGCAGAACGGCTTGTTGCTTTCGCCGTCGTGGAGGGAATTTTCTTCTCTGGTTCCTTT 322669 Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 || ||||| |||||| ||||||| | || | |||| || || || | ||| |||||| Sbjct 322668 GCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCAGGCCTTACATTCTCTAATGAG 322609 Query 102023 TTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGT 102082 ||||||| || ||||| || || || |||||||| || | |||| | | | Sbjct 322608 CTCATTTCCAGAGACGAGGGCCTCCACACTGACTTTGCTTGTCTTTTGTTTA----GCTT 322553 Query 102083 TTTGTTGA-TACCCCATCAAGAGAAAGGATTCTTGAA-ATTGTCACTGAAGCCGTCCGAA 102140 ||| || || ||| || || | | ||| || |||||| ||||||| ||| Sbjct 322552 GTTGAAGAATAAGCCAACAGTCGATACG--TCTACAAGATTGTCTCTGAAGCTGTCGAGC 322495 Query 102141 TTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGT 102200 |||| ||||||||| | | | |||| ||||| ||| | | |||||||||| | | Sbjct 322494 TTGAGCAAGAATTTTTGATTGACGCCCTCCCTGTGAAACTGATTGGAATGAACTCTGACT 322435 Query 102201 TGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAA 102260 |||||||||||||||||||||| || ||||| | ||| |||||| |||| | Sbjct 322434 TGATGAGCCAGTACATTGAATTCGTCGCAGACAGACTTTTGGTTTCTTTGGGCTGTCCTA 322375 Query 102261 AGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCT-CGAGAATAAG 102319 ||| ||| || || |||||||| |||||||| || ||| | | || | ||| Sbjct 322374 AGCTCTACAACGTCGAGAACCCCTTTGACTTCATGGATCTCATCTCCTTGCAAGGA-AAG 322316 Query 102320 ACCAACTTTTTTGAAAAGAGAGT 102342 |||||||| ||||| |||| ||| Sbjct 322315 ACCAACTTCTTTGAGAAGAAAGT 322293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578459257335