Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq335 84.2 1e-11 >seq335 Length=386496 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| || | || | || ||||| || || || ||||| ||||| | | | | Sbjct 159103 CGCAAGACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGGCCG 159044 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||| ||||||||| ||| || |||||||||||||| | || || ||||| || Sbjct 159043 TCTTCCAACTGCTTTCCAGCAAAGATCAAACGTTGCTGGTCGGGTGGAATTCCTTCCTTA 158984 Query 33275 TC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | ||| || || | | ||| || || || || ||| |||| ||| Sbjct 158983 TCCTGGATCTTGGCC---TTAACGTTCTCAATGGTATCAGAGGATTCAACTTCCAAAGTG 158927 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || ||||| || | ||| || ||||| |||||||| Sbjct 158926 ATGGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 158889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318775902210426