Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq90 82.4 6e-11 >seq90 Length=625778 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || ||||||||||| | Sbjct 499432 CCTCCACGGAGACGCAAGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 499373 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || ||| | || || ||||| ||||| || Sbjct 499372 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCAGGTGGG 499313 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || ||| || | | | ||||||| | |||| Sbjct 499312 ATTCCCTCCTTGTCCTGGATCTTGGC--CTTGACGTTTTCGATAGTGTCGGAAGACTCCA 499255 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTT 16937 || | ||||||||| || || || || || ||||| || |||||||||| Sbjct 499254 CCTCGAGGGTGATGGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATTT 499204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085842526630