Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq157 152 8e-32 >seq157 Length=558770 Score = 152 bits (168), Expect = 8e-32 Identities = 340/508 (67%), Gaps = 12/508 (2%) Strand=Plus/Plus Query 159629 TTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGAT 159688 |||| ||||| ||| |||||||| || ||||||||||| || | || ||| || Sbjct 322278 TTCTGGTATTCTCCCACTTTCTTCTCAAAGAAGTTGGTCTTTCCTTGCAAGGAGATGAGA 322337 Query 159689 TCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGC 159748 |||||||| | || ||||||| |||| ||| |||| ||| | || | || ||| Sbjct 322338 TCCATGAAGTCAAAGGGGTTCTCGACGTTGTAGAGCTTAGGACAGCCCAAAGAAACCAAA 322397 Query 159749 AACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGC 159808 | |||||||| || ||||| ||||| | |||| ||| |||| || || | ||| Sbjct 322398 AGTCTGTCTGCGACGAATTCAATGTACTGGCTCATCAAGTCAGAGTTCATTCCAATCAGT 322457 Query 159809 CTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATC 159868 | || ||||| || || || ||| || | ||||| |||||| ||||| | |||||| Sbjct 322458 TTCACAGGGAGGGCGTCAATCAAAAATTCTTGCTCAAGCTCGACAGCTTCAGAGACAATC 322517 Query 159869 TGCGAGACACGT-TCGTACCCCGGC---TTGCCCAAAATGTGGTCCTTAAACAGGAGGCA 159924 | || |||| ||| ||| || ||| | | |||||| || || Sbjct 322518 TTGTAG--ACGTATCGACTGTTGGCTTATTCTTCAACAAG------CTAAACAAAAGACA 322569 Query 159925 CGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCC 159984 |||||||| ||| || |||||||| | || |||| ||| || || | | ||||| Sbjct 322570 AGCAAAGTCAGTGTGGAGGCCCTCGTCTCTGGAAATGAGCTCATTAGAGAATGTAAGGCC 322629 Query 159985 CGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGAT 160044 ||||| | |||||| |||||||| || |||| ||||| | ||| || || || Sbjct 322630 TGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGAACCAGAGAAGAAAAT 322689 Query 160045 CCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGT 160104 ||||||||| | || || || || |||| || | || |||| ||||| | | Sbjct 322690 TCCCTCCACGACGGCGAAAGCAACAAGCCGTTCTGCGAAGGAGGAAGACTTGTCAGAGAT 322749 Query 160105 CCACCTTTTGGCCCATTCAGCCTTCTTT 160132 |||| | ||||| || ||||||||| Sbjct 322750 CCACTTGAGAGCCCAATCGGCCTTCTTT 322777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150856464720