Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq393 96.9 3e-14 >seq393 Length=271400 Score = 96.9 bits (106), Expect = 3e-14 Identities = 170/244 (70%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 |||||||| ||| | || || |||||||| || || | || || | ||||| ||| | Sbjct 134452 TGTACCCTTATTCTCACGGAAGGAGATTCCGCCAAGTCGTTGGCGGTTTCTGGACTTTCT 134393 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 || ||||| | || | |||||||| ||||||||| | || ||||||||||||||| | Sbjct 134392 GTGATTGGTCGTGACAACTATGGAGTGTTCCCACTTCGTGGTAAACTTTTGAATGTTCGA 134333 Query 635561 GATGCTAGTCCTaaaaaaaT-TG-CTGATAATGAGGAAATTACAGCAATCaaaaaaaTTG 635618 ||||| | | ||| | || | | |||| ||| ||||| || | || | ||| Sbjct 134332 GATGC--GGCAGGAAATCTTGTGTCAAACAATGCGGAGATTACGGCGTTGAAGCAGATTA 134275 Query 635619 TTGGACTTGAACAAGGAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTATTA 635678 ||||| | | ||||| ||| ||||| | ||||| ||| || ||||| |||| Sbjct 134274 TTGGATTGCAGCAAGGGAAAAAGTATGAGAGTGCCAAAGATTTGCGGTATGGACACATTA 134215 Query 635679 TGAT 635682 |||| Sbjct 134214 TGAT 134211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780800714620522