Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq157 123 3e-23 >seq157 Length=558770 Score = 123 bits (136), Expect = 3e-23 Identities = 347/517 (67%), Gaps = 17/517 (3%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCAT-CAAGGCTAATGTTTTCCAT 117044 || || || ||| ||||||||||||||||||||| || | ||||| | || ||||| Sbjct 322284 TATTCTCCCACTTTCTTCTCAAAGAAGTTGGTCTTTCCTTGCAAGGAGA-TGAGATCCAT 322342 Query 117045 AAAGTCAAATGGATTCTTCGCGTTCCAAATGGGTGG-CACCCCAACTTGTTTGAGGAGAC 117103 |||||||| || |||| |||| | | || || ||||| | || | Sbjct 322343 GAAGTCAAAGGGGTTCTCGACGTTGTAGAGCTTAGGACAGCCCAAAGAAACCAAA-AGTC 322401 Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATT-A 117162 || | || | |||||||||| | |||| ||||||||||| || || || || | Sbjct 322402 TGTCTGCGACGAATTCAATGTACTGGCTCATCAAGTCAGAGTTCATTCCAATCAGTTTCA 322461 Query 117163 CATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCG 117222 || ||||| ||||| | | || ||| ||||| ||| || || || || || | Sbjct 322462 CA-GGGAGGGCGTCAATCAAAAATTCTTGCTCAAGCTCGACAGCTTCAGAGACAATCTTG 322520 Query 117223 TGGATAGTTTCGGTAGTGGGTCTATTACGCAA-AGTCTTGAAGAGCTCCACGGCAAACTC 117281 | || || ||| || || |||| ||| | || | | || | |||| || Sbjct 322521 TAGAC-GTATCGACTGTTGGCTTATTCTTCAACAAGCTAAACAAAAGACAAG-CAAAGTC 322578 Query 117282 CTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAG 117341 |||||| ||||| |||| |||||| || ||||| ||||| ||||||||||| | Sbjct 322579 AGTGTGGAGGCCCTCGTCTCTGGAAATGAGCTCATTAGAGAATGTAAGGCCTGGCATCAA 322638 Query 117342 ACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCA 117400 || |||||||| | ||| | || | ||| || || || |||||||| || ||||||| Sbjct 322639 GCCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGAACCAGAGAAGAAAATTCCCTCCA 322697 Query 117401 CACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACCATT 117457 | || || |||| ||| || || ||||||||| ||||| ||||| | ||| | Sbjct 322698 CGACGGCGAAAGCAACAAGCCGTTCTGCGAAGGAGGAAGACT---TGTCAGAGATCCACT 322754 Query 117458 TCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 | | ||||| | |||||||| ||||||||| || Sbjct 322755 TGAGAGCCCAATCGGCCTTCTTTCTAATACATGGAAC 322791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977577229880