Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq335 102 6e-17 >seq335 Length=386496 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||||||||| ||||| ||||| || |||| | || ||||||||||| |||||||| Sbjct 39020 TCTTTTTGAATGTTGTAGTCAGAGAGGGTTCGGCCATCTTCCAACTGCTTTCCGGCAAAG 39079 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| ||||| || || | || | || |||||||| ||||| || ||| Sbjct 39080 ATCAAACGCTGCTGGTCAGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 39139 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | || ||||| | ||||| || ||||| |||||||| || ||| Sbjct 39140 TCAATGGTATCGGAGGATTCAACCTCAAGAGTAATGGTCTTTCCAGTCAAAGTCTTGACA 39199 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 39200 AAGATCTGCAT 39210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935571150151