Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq179 109 7e-19 >seq179 Length=512839 Score = 109 bits (120), Expect = 7e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 47969 CACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATG 48028 |||| | ||||||| |||||||| || || || || | || |||||||| |||| Sbjct 289750 CACCTCTTCTTGGACTCTCATGATTGAACAGGATTCCGTTGCATGCATACATATTATATG 289691 Query 48029 ATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAAC 48088 || ||||| ||| || |||||||| |||| | |||||||| || || ||| | Sbjct 289690 CCTCTCGATAATTCACAACAATCCAGTATGCATACTGCTTTGCAACTCCGTATGGACTTC 289631 Query 48089 GTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCAC 48148 ||| ||||||||||| || || |||||||| |||| || || || || || || |||| Sbjct 289630 TTGGGTAGAAAGGTGTTGTTTCGCTCTGTGGAATCTCCTGGACTTTTCCGTAGAGCTCAC 289571 Query 48149 TGGTGGATGCTTGATAGA 48166 | || |||||||||| Sbjct 289570 TTGTACTGGCTTGATAGA 289553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665490764736840