Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq157 123 3e-23 seq393 91.5 2e-13 >seq157 Length=558770 Score = 123 bits (136), Expect = 3e-23 Identities = 361/540 (67%), Gaps = 17/540 (3%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT---TGACACAAAGTCT 65064 || ||||||||| |||||||| | ||||| | || ||| | ||||| ||||| Sbjct 322791 GTTCCATGTATTAGAAAGAAGGCCGATTGGGCTCTCAAGTGGATCTCTGACA---AGTCT 322735 Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124 ||||||||| || || ||| |||| || || |||||||| || |||||||| || Sbjct 322734 TCCTCCTTCGCAGAACGGCTTGTTGCTTTCGCCGTCGTGGAGGGAATTTTCTTCTCTGGT 322675 Query 65125 TCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183 || || ||| | || | ||| | |||||||| || | ||||||||||| ||||| Sbjct 322674 TCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCAGGCCTTACATTCTC 322616 Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAA 65243 ||||| || |||||| |||| ||||| |||||| || |||| | || | | | Sbjct 322615 TAATGAGCTCATTTCCAGAGACGAGGGCCTCCACACTGACTTTG-CTTGTCTTTTGTTTA 322557 Query 65244 GACT-TTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTG 65302 | | ||| |||| || || ||| || || || || || || || || | Sbjct 322556 GCTTGTTGAAGAATAAGCCAACAGTCGATAC-GTCTACAAGATTGTCTCTGAAGCTGTCG 322498 Query 65303 AGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGT-AATCTCATCGGTATGAACTCT 65361 || ||||| ||| || | | ||||| ||||| ||| || || || || ||||||||| Sbjct 322497 AGCTTGAGCAAGAATTTTTGATTGACGCCCTCCC-TGTGAAACTGATTGGAATGAACTCT 322439 Query 65362 GAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTG 65421 || |||| | |||||||||| | || | || | || | ||||| || Sbjct 322438 GACTTGATGAGCCAGTACATTGAATTCGTCGCAGACAGACT-TTTGGTTTCTTTGGGCTG 322380 Query 65422 -CCACCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTG-ATG 65479 || | | |||| |||| || |||||||| ||||| || | ||||| | | Sbjct 322379 TCCTAAGCTCTACAACGTCGAGAACCCCTTTGACTTCATGGATCTCA-TCTCCTTGCAAG 322321 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTATGGGAAATTGGATGATGATGTTG 65539 | ||||||||||||||||||||| ||| || || || |||| | | | || ||||| Sbjct 322320 GAAAGACCAACTTCTTTGAGAAGAAAGTGGGAGAATACCAGAAAGCGTAAGTTGTTGTTG 322261 >seq393 Length=271400 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 13607 TGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCT 13666 ||||| || ||| |||| || || ||||| || || | | |||||| | || || ||| Sbjct 134452 TGTACCCTTATTCTCACGGAAGGAGATTCCGCCAAGTCGTTGGCGGTTTCTGGACTTTCT 134393 Query 13667 GTCGTTGGTCGTGATCACTACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGG 13726 || |||||||||| |||| || |||||||||||||| |||||| | ||||||||| Sbjct 134392 GTGATTGGTCGTGACAACTATGGAGTGTTCCCACTTCGTGGTAAACTTTTGAATGTTCGA 134333 Query 13727 GACGC 13731 || || Sbjct 134332 GATGC 134328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566341238560