Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq38 205 1e-47 seq13 205 1e-47 >seq38 Length=108757 Score = 205 bits (226), Expect = 1e-47 Identities = 860/1342 (64%), Gaps = 33/1342 (2%) Strand=Plus/Plus Query 68519 CGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAA 68578 ||||||| || || | || || ||||| | || ||| |||||||| ||||||||| | Sbjct 86881 CGATGAATGCACCACGGTCAGCAGCCATGTCGATGATAACCTTTTGAGAAATTTCCCAGA 86940 Query 68579 TAGTCTTAAAAATCTGTTTGATATCATCTGGAAG---GCTCGTATTTTGAATGGATCCAC 68635 |||||| | || |||| |||| |||||| ||| | ||| | |||||| Sbjct 86941 CAGTCTTGTAGATACCCTTGAGATCAGCTGGAATAGCGCTGATGCGTTGGACTGATCCAT 87000 Query 68636 CATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTC 68695 || | ||||| ||||| || || ||||| || || || || | Sbjct 87001 TCTCAGCAATAATACGGTTCTTCATGGTGTCGTTCCATAAACCAAGTTCGGTCAAGTCCT 87060 Query 68696 TAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATAT 68755 | | | |||||||| || ||||| ||||| || | | || | |||||||| |||| Sbjct 87061 TCAACAAGTGCGGATTCACAATTTGGAATTCACCCGCAAGAACACGGCGAGTGTAGATAT 87120 Query 68756 TACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTG 68815 | || || || ||||| | | | || || || || ||||| |||| || |||||||||| Sbjct 87121 TGCTTGTGTACGGTTCAAAACACTCGTTGTTACCAAGAATCTGAGATGTCGATGCAGTTG 87180 Query 68816 GCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGAT 68875 |||| || |||| ||| ||| |||| | ||| | | | ||| | ||| Sbjct 87181 GCATTGGAGCCATCAACAAAGAGTTTCGGACACCGTACTTGGCCACCTTAGCGCGAAGAG 87240 Query 68876 GTTTCCAATCCCAAAGATCAGA--TGGTACAA-CA---TTCCAAAGATCGTATTGTAGAA 68929 | ||| ||| || ||||| || | || || |||||||| || ||| | Sbjct 87241 CATCCCAGTCCAAA---TCAGAGTTGCTCAAATCAATGTTCCAAAGGTCTGGTTGCAACT 87297 Query 68930 TTCCGTTACTTGCATATGA--TCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAG 68987 ||| || | ||| | ||| | || ||| || || || || | ||| || | Sbjct 87298 GTCCTTT--TGACATTGGGCTTCCTTCGTAAGTTGAGTATGGACCGTCTTTTTCGGCAAT 87355 Query 68988 TTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATC 69047 ||||| ||||| | ||| |||| || || |||| || |||||||| || || || Sbjct 87356 CTCACACGAAGCCTCCACGGCAGCGTAGTACATGTTTTCAAAGATCTTCTTGTTCAGCTC 87415 Query 69048 TTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTG 69107 || ||| || ||||||||| | | | || || ||||| || | ||| || Sbjct 87416 TTTCGCTCCTTCGGAGTCGAATGGAAGACGCATCTTGATGAAAGCATCGGCAAGTCCTTG 87475 Query 69108 AACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATA 69167 ||| |||| ||||||||||| || | | | ||||| | | || || | ||| || Sbjct 87476 AACTCCAAGACCGATAGGTCGGTGACGCATGTTTGAGTTCTTGGCCTCAATGACAGGGTA 87535 Query 69168 ATAATTAATATCTATAATTTTATT-AAGATTTCGGACTACTACTTTAACCACGTCCTTTA 69226 ||||||| || || || || || ||| | | || | | |||||| || | | Sbjct 87536 GAAATTAATGTCAATGATCTTGTTCAAGTTCTTGGTC-ATGACTTTAGTGACCTGGCGGA 87594 Query 69227 GTTTGAGAAAATC--AAATCGTCCATCT-ATAACAAACATATTCAGTGCTACAGATGCTA 69283 |||| ||| || || | ||| | | |||||| || | | ||| || | Sbjct 87595 GTTTCTCAAAGTCGTAAGTAGTCTTGTTCACAACAAAGGCTGGAAGGGAGATAGAAGCAA 87654 Query 69284 GATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTAC 69343 | ||||| || || | || | || | | || | | || ||||| || || |||| Sbjct 87655 GGTTACAGACGGCGATTTCGTCAGGAGAAGTGTACTCGACGATTTCTGTGCAAAGGTTAC 87714 Query 69344 TACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAA 69403 | || ||||| || |||| || || || ||| ||| |||||||||| || ||||| | Sbjct 87715 TGCACTTGATGGTGCCCAAGTTCTGTTGGTTAGACTTGCTGTTACAGGCATCTTTGTACA 87774 Query 69404 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAG 69463 || | || |||||||| || | ||||| || ||||| | | ||||| | || Sbjct 87775 ACATGTATGGGGTACCAGTCTCGGTTTGAGACTCAATAATGGCGTACCAAAGCTTCTGAG 87834 Query 69464 CATTTAT-----TACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTC 69518 | || || ||||| | ||| ||| | || ||||| | ||| || ||| Sbjct 87835 CCTTGATAACTTTACGGGCC---AACCCTTTGCGTT--CATATGATTCATAAAGTGCTTC 87889 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 || | || ||||| || ||||| || || |||| ||||||| | | ||||| Sbjct 87890 AAACTTTTCGCCCCAGCAGTCTTCCAACCCTGGCGCTTCACTTGGACAGAAGAGAGACCA 87949 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGA 69637 || ||| || || || |||||||| | || ||||| ||||| ||| || | Sbjct 87950 GTCACCATTGCTCTCCACACGCTTCATAAACAAGTCACAGATCCAGAGAGC-ATAGAACA 88008 Query 69638 GATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAA 69697 |||| | | ||||| || || || ||||| || || ||||| || || || | | Sbjct 88009 AGTCTCGAGCGCGGTTTTCCTCTTTACCAGTATTCTTCTTGAGATCAAGGAATTCAAAGA 88068 Query 69698 TATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCT 69757 |||| | |||||||| || | || || || | | | || || || || || ||||| | Sbjct 88069 TATCTGCGTGCCATGGCTCCAAGTAGATAGCAAAGGCCCCGGGACGCTTGTTGCCTCCTT 88128 Query 69758 GATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATT 69817 |||| | || | ||||||||||| |||| | ||||||||||| || ||||| || | Sbjct 88129 GATCCACATAGCGAGCAGTGTTATTGAAGACACGAAGCATCGGAATGATTCCATTCGAAT 88188 Query 69818 TACCATTTGTTCCAGAAATATA 69839 || || ||||||| ||| || Sbjct 88189 GTCCGTTGGTTCCAGCAATGTA 88210 >seq13 Length=692062 Score = 205 bits (226), Expect = 1e-47 Identities = 860/1342 (64%), Gaps = 33/1342 (2%) Strand=Plus/Plus Query 68519 CGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAA 68578 ||||||| || || | || || ||||| | || ||| |||||||| ||||||||| | Sbjct 276677 CGATGAATGCACCACGGTCAGCAGCCATGTCGATGATAACCTTTTGAGAAATTTCCCAGA 276736 Query 68579 TAGTCTTAAAAATCTGTTTGATATCATCTGGAAG---GCTCGTATTTTGAATGGATCCAC 68635 |||||| | || |||| |||| |||||| ||| | ||| | |||||| Sbjct 276737 CAGTCTTGTAGATACCCTTGAGATCAGCTGGAATAGCGCTGATGCGTTGGACTGATCCAT 276796 Query 68636 CATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTC 68695 || | ||||| ||||| || || ||||| || || || || | Sbjct 276797 TCTCAGCAATAATACGGTTCTTCATGGTGTCGTTCCATAAACCAAGTTCGGTCAAGTCCT 276856 Query 68696 TAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATAT 68755 | | | |||||||| || ||||| ||||| || | | || | |||||||| |||| Sbjct 276857 TCAACAAGTGCGGATTCACAATTTGGAATTCACCCGCAAGAACACGGCGAGTGTAGATAT 276916 Query 68756 TACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTG 68815 | || || || ||||| | | | || || || || ||||| |||| || |||||||||| Sbjct 276917 TGCTTGTGTACGGTTCAAAACACTCGTTGTTACCAAGAATCTGAGATGTCGATGCAGTTG 276976 Query 68816 GCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGAT 68875 |||| || |||| ||| ||| |||| | ||| | | | ||| | ||| Sbjct 276977 GCATTGGAGCCATCAACAAAGAGTTTCGGACACCGTACTTGGCCACCTTAGCGCGAAGAG 277036 Query 68876 GTTTCCAATCCCAAAGATCAGA--TGGTACAA-CA---TTCCAAAGATCGTATTGTAGAA 68929 | ||| ||| || ||||| || | || || |||||||| || ||| | Sbjct 277037 CATCCCAGTCCAAA---TCAGAGTTGCTCAAATCAATGTTCCAAAGGTCTGGTTGCAACT 277093 Query 68930 TTCCGTTACTTGCATATGA--TCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAG 68987 ||| || | ||| | ||| | || ||| || || || || | ||| || | Sbjct 277094 GTCCTTT--TGACATTGGGCTTCCTTCGTAAGTTGAGTATGGACCGTCTTTTTCGGCAAT 277151 Query 68988 TTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATC 69047 ||||| ||||| | ||| |||| || || |||| || |||||||| || || || Sbjct 277152 CTCACACGAAGCCTCCACGGCAGCGTAGTACATGTTTTCAAAGATCTTCTTGTTCAGCTC 277211 Query 69048 TTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTG 69107 || ||| || ||||||||| | | | || || ||||| || | ||| || Sbjct 277212 TTTCGCTCCTTCGGAGTCGAATGGAAGACGCATCTTGATGAAAGCATCGGCAAGTCCTTG 277271 Query 69108 AACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATA 69167 ||| |||| ||||||||||| || | | | ||||| | | || || | ||| || Sbjct 277272 AACTCCAAGACCGATAGGTCGGTGACGCATGTTTGAGTTCTTGGCCTCAATGACAGGGTA 277331 Query 69168 ATAATTAATATCTATAATTTTATT-AAGATTTCGGACTACTACTTTAACCACGTCCTTTA 69226 ||||||| || || || || || ||| | | || | | |||||| || | | Sbjct 277332 GAAATTAATGTCAATGATCTTGTTCAAGTTCTTGGTC-ATGACTTTAGTGACCTGGCGGA 277390 Query 69227 GTTTGAGAAAATC--AAATCGTCCATCT-ATAACAAACATATTCAGTGCTACAGATGCTA 69283 |||| ||| || || | ||| | | |||||| || | | ||| || | Sbjct 277391 GTTTCTCAAAGTCGTAAGTAGTCTTGTTCACAACAAAGGCTGGAAGGGAGATAGAAGCAA 277450 Query 69284 GATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTAC 69343 | ||||| || || | || | || | | || | | || ||||| || || |||| Sbjct 277451 GGTTACAGACGGCGATTTCGTCAGGAGAAGTGTACTCGACGATTTCTGTGCAAAGGTTAC 277510 Query 69344 TACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAA 69403 | || ||||| || |||| || || || ||| ||| |||||||||| || ||||| | Sbjct 277511 TGCACTTGATGGTGCCCAAGTTCTGTTGGTTAGACTTGCTGTTACAGGCATCTTTGTACA 277570 Query 69404 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAG 69463 || | || |||||||| || | ||||| || ||||| | | ||||| | || Sbjct 277571 ACATGTATGGGGTACCAGTCTCGGTTTGAGACTCAATAATGGCGTACCAAAGCTTCTGAG 277630 Query 69464 CATTTAT-----TACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTC 69518 | || || ||||| | ||| ||| | || ||||| | ||| || ||| Sbjct 277631 CCTTGATAACTTTACGGGCC---AACCCTTTGCGTT--CATATGATTCATAAAGTGCTTC 277685 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 || | || ||||| || ||||| || || |||| ||||||| | | ||||| Sbjct 277686 AAACTTTTCGCCCCAGCAGTCTTCCAACCCTGGCGCTTCACTTGGACAGAAGAGAGACCA 277745 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGA 69637 || ||| || || || |||||||| | || ||||| ||||| ||| || | Sbjct 277746 GTCACCATTGCTCTCCACACGCTTCATAAACAAGTCACAGATCCAGAGAGC-ATAGAACA 277804 Query 69638 GATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAA 69697 |||| | | ||||| || || || ||||| || || ||||| || || || | | Sbjct 277805 AGTCTCGAGCGCGGTTTTCCTCTTTACCAGTATTCTTCTTGAGATCAAGGAATTCAAAGA 277864 Query 69698 TATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCT 69757 |||| | |||||||| || | || || || | | | || || || || || ||||| | Sbjct 277865 TATCTGCGTGCCATGGCTCCAAGTAGATAGCAAAGGCCCCGGGACGCTTGTTGCCTCCTT 277924 Query 69758 GATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATT 69817 |||| | || | ||||||||||| |||| | ||||||||||| || ||||| || | Sbjct 277925 GATCCACATAGCGAGCAGTGTTATTGAAGACACGAAGCATCGGAATGATTCCATTCGAAT 277984 Query 69818 TACCATTTGTTCCAGAAATATA 69839 || || ||||||| ||| || Sbjct 277985 GTCCGTTGGTTCCAGCAATGTA 278006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905047760680