Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 7e-11 >seq2 Length=712398 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || | ||| || || |||| || ||||| Sbjct 184694 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGC 184753 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 || || || || || |||||||||||||| |||||| | | ||| |||||| ||| || Sbjct 184754 TTTCCGGCGAAGATGAGACGCTGCTGGTCAGGTGGG-ATTCCCTCCTTGTCCTGGATCTT 184812 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| || | | || ||| ||||| || || | ||||| | |||||||| Sbjct 184813 GGCCTTGACGTTCTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTTCCCGT 184872 Query 39261 CAGCGTTTTAACAAAGATTTGCATCTT 39287 || || || || || |||||||| || Sbjct 184873 AAGGGTCTTGACGAAAATTTGCATGTT 184899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543312266981