Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoclosmatium_20globosum_20[genbank_20GCA_5F002104985.1_202017-04- 20] 437 sequences; 57,018,351 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq38 161 1e-34 seq13 161 1e-34 seq157 104 3e-17 >seq38 Length=108757 Score = 161 bits (178), Expect = 1e-34 Identities = 866/1365 (63%), Gaps = 23/1365 (2%) Strand=Plus/Plus Query 75522 CGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAA 75581 ||||||| || || | ||||| ||||| | || || |||||||| ||||||||| | Sbjct 86881 CGATGAATGCACCACGGTCAGCAGCCATGTCGATGATAACCTTTTGAGAAATTTCCCAGA 86940 Query 75582 TAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTGTATT---TTGAATGGATCCGC 75638 ||| ||| | | |||| |||| |||||| | | | ||| | ||||| Sbjct 86941 CAGTCTTGTAGATACCCTTGAGATCAGCTGGAATAGCGCTGATGCGTTGGACTGATCCAT 87000 Query 75639 CATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTC 75698 |||| ||||| ||||| || || ||||| || ||||| || | Sbjct 87001 TCTCAGCAATAATACGGTTCTTCATGGTGTCGTTCCATAAACCAAGTTCGGTCAAGTCCT 87060 Query 75699 TAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATAT 75758 | | | || ||||| |||||||| ||||| || | | || | |||||||| |||| Sbjct 87061 TCAACAAGTGCGGATTCACAATTTGGAATTCACCCGCAAGAACACGGCGAGTGTAGATAT 87120 Query 75759 TACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCG 75818 | || || || ||||| | | | || ||||| || | ||| |||| || || ||||| | Sbjct 87121 TGCTTGTGTACGGTTCAAAACACTCGTTGTTACCAAGAATCTGAGATGTCGATGCAGTTG 87180 Query 75819 GCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGAT 75878 |||| || |||| ||| ||| |||| || ||| | | | ||| | ||| Sbjct 87181 GCATTGGAGCCATCAACAAAGAGTTTCGGACACCGTACTTGGCCACCTTAGCGCGAAGAG 87240 Query 75879 ATTTCCAATCCCAA--AGATCTGATGGTA-CAACATCCCAGAGATCGTATTGTAGAATTC 75935 | ||| ||| || ||| || | | ||| | ||| || || ||| | || Sbjct 87241 CATCCCAGTCCAAATCAGAGTTGCTCAAATCAATGTTCCAAAGGTCTGGTTGCAACTGTC 87300 Query 75936 CGTTGCTAGCATATGA--TCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 | || | ||| | ||| | || ||| ||| | ||||| ||||| || | || Sbjct 87301 CTTT--TGACATTGGGCTTCCTTCGTAAGTTGAGTATGGACCGTCTTTTTCGGCAATCTC 87358 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG 76053 || ||||| | ||| |||| || || |||| || |||||||| || || |||| Sbjct 87359 ACACGAAGCCTCCACGGCAGCGTAGTACATGTTTTCAAAGATCTTCTTGTTCAGCTCTTT 87418 Query 76054 CGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAAC 76113 |||| | || || ||| | | | || || ||||| || ||||| ||||| Sbjct 87419 CGCTCCTTCGGAGTCGAATGGAAGACGCATCTTGATGAAAGCATCGGCAAGTCCTTGAAC 87478 Query 76114 TCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATA 76173 ||||| ||| ||||||| || | | | || || | | || || | |||||| | Sbjct 87479 TCCAAGACCGATAGGTCGGTGACGCATGTTTGAGTTCTTGGCCTCAATGACAGGGTAGAA 87538 Query 76174 ATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTT 76233 |||||| || || || || || | || || | |||||| || | ||||| Sbjct 87539 ATTAATGTCAATGATCTTGTTCAAGTTCTTGGTCATGACTTTAGTGACCTGGCGGAGTTT 87598 Query 76234 GAGAAAATCA-AATTTTCCATCTATCACAA-ACATATT--AAGAGCTATAGATGCTAGAT 76289 ||| || || | | | | |||||| | | | ||| | ||||| || || | Sbjct 87599 CTCAAAGTCGTAAGTAGTCTTGT-TCACAACAAAGGCTGGAAGGGAGATAGAAGCAAGGT 87657 Query 76290 TACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTAC 76349 |||| ||||| | || | || | | || | | || || ||||| || ||||| | Sbjct 87658 TACAGACGGCGATTTCGTCAGGAGAAGTGTACTCGACGATTTCTGTGCAAAGGTTACTGC 87717 Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409 ||||||| || || | || |||||||| ||| ||||||| | || || || | | Sbjct 87718 ACTTGATGGTGCCCAAGTTCTGTTGGTTAGACTTGCTGTTACAGGCATCTTTGTACAACA 87777 Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCT 76468 | || || ||||| || | || || || ||||| | | ||| | | ||| ||| Sbjct 87778 TGTATGGGGTACCAGTCTCGGTTTGAGACTCAATAATGGCGTACCAAA-GCTTCTGAGCC 87836 Query 76469 TTTATTA-TAGATTTGT-ATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATT 76526 || || | | | | | | ||| | ||||||| | ||| | |||||| | Sbjct 87837 TTGATAACTTTACGGGCCAACCCTTTGCG--TTCATATGATTCATAAAGTGCTTCAAACT 87894 Query 76527 CATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCAC 76586 || ||||| || ||||| || || |||| | ||||| | | ||||| |||| Sbjct 87895 TTTCGCCCCAGCAGTCTTCCAACCCTGGCGCTTCACTTGGACAGAAGAGAGACCAGTCAC 87954 Query 76587 CATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTC 76646 ||| || || || |||||||| | ||| ||||| |||||| || | |||| Sbjct 87955 CATTGCTCTCCACACGCTTCATAAACAAGTCACAGATCCAGAGAGCATAGAACAAGTCTC 88014 Query 76647 GGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAG 76706 | | | ||| || || || |||||||| || ||||| ||||| || | ||||| | Sbjct 88015 GAGCGCGGTTTTCCTCTTTACCAGTATTCTTCTTGAGATCAAGGAATTCAAAGATATCTG 88074 Query 76707 AATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTA 76766 |||||||| || | || || || | | || || || || || ||||| ||||| | Sbjct 88075 CGTGCCATGGCTCCAAGTAGATAGCAAAGGCCCCGGGACGCTTGTTGCCTCCTTGATCCA 88134 Query 76767 TATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAG-ATGTACCA 76825 ||| | ||||||||||| | || | | ||| ||||| || || || | |||| || Sbjct 88135 CATAGCGAGCAGTGTTATTGAAGACACGAAGCATCGGAATGATTCCATTCGAATGT-CCG 88193 Query 76826 TTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATA 76870 || ||||||| ||| || || | |||||||| ||| |||| Sbjct 88194 TTGGTTCCAGCAATGTACGAACCGGAGGCACGAATCTTATGAATA 88238 >seq13 Length=692062 Score = 161 bits (178), Expect = 1e-34 Identities = 866/1365 (63%), Gaps = 23/1365 (2%) Strand=Plus/Plus Query 75522 CGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAA 75581 ||||||| || || | ||||| ||||| | || || |||||||| ||||||||| | Sbjct 276677 CGATGAATGCACCACGGTCAGCAGCCATGTCGATGATAACCTTTTGAGAAATTTCCCAGA 276736 Query 75582 TAGTTTTGAAAACTTGTTTGATATCATCTGGAAGATTTGTATT---TTGAATGGATCCGC 75638 ||| ||| | | |||| |||| |||||| | | | ||| | ||||| Sbjct 276737 CAGTCTTGTAGATACCCTTGAGATCAGCTGGAATAGCGCTGATGCGTTGGACTGATCCAT 276796 Query 75639 CATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTC 75698 |||| ||||| ||||| || || ||||| || ||||| || | Sbjct 276797 TCTCAGCAATAATACGGTTCTTCATGGTGTCGTTCCATAAACCAAGTTCGGTCAAGTCCT 276856 Query 75699 TAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATAT 75758 | | | || ||||| |||||||| ||||| || | | || | |||||||| |||| Sbjct 276857 TCAACAAGTGCGGATTCACAATTTGGAATTCACCCGCAAGAACACGGCGAGTGTAGATAT 276916 Query 75759 TACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCG 75818 | || || || ||||| | | | || ||||| || | ||| |||| || || ||||| | Sbjct 276917 TGCTTGTGTACGGTTCAAAACACTCGTTGTTACCAAGAATCTGAGATGTCGATGCAGTTG 276976 Query 75819 GCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGAT 75878 |||| || |||| ||| ||| |||| || ||| | | | ||| | ||| Sbjct 276977 GCATTGGAGCCATCAACAAAGAGTTTCGGACACCGTACTTGGCCACCTTAGCGCGAAGAG 277036 Query 75879 ATTTCCAATCCCAA--AGATCTGATGGTA-CAACATCCCAGAGATCGTATTGTAGAATTC 75935 | ||| ||| || ||| || | | ||| | ||| || || ||| | || Sbjct 277037 CATCCCAGTCCAAATCAGAGTTGCTCAAATCAATGTTCCAAAGGTCTGGTTGCAACTGTC 277096 Query 75936 CGTTGCTAGCATATGA--TCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 | || | ||| | ||| | || ||| ||| | ||||| ||||| || | || Sbjct 277097 CTTT--TGACATTGGGCTTCCTTCGTAAGTTGAGTATGGACCGTCTTTTTCGGCAATCTC 277154 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG 76053 || ||||| | ||| |||| || || |||| || |||||||| || || |||| Sbjct 277155 ACACGAAGCCTCCACGGCAGCGTAGTACATGTTTTCAAAGATCTTCTTGTTCAGCTCTTT 277214 Query 76054 CGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAAC 76113 |||| | || || ||| | | | || || ||||| || ||||| ||||| Sbjct 277215 CGCTCCTTCGGAGTCGAATGGAAGACGCATCTTGATGAAAGCATCGGCAAGTCCTTGAAC 277274 Query 76114 TCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATA 76173 ||||| ||| ||||||| || | | | || || | | || || | |||||| | Sbjct 277275 TCCAAGACCGATAGGTCGGTGACGCATGTTTGAGTTCTTGGCCTCAATGACAGGGTAGAA 277334 Query 76174 ATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTT 76233 |||||| || || || || || | || || | |||||| || | ||||| Sbjct 277335 ATTAATGTCAATGATCTTGTTCAAGTTCTTGGTCATGACTTTAGTGACCTGGCGGAGTTT 277394 Query 76234 GAGAAAATCA-AATTTTCCATCTATCACAA-ACATATT--AAGAGCTATAGATGCTAGAT 76289 ||| || || | | | | |||||| | | | ||| | ||||| || || | Sbjct 277395 CTCAAAGTCGTAAGTAGTCTTGT-TCACAACAAAGGCTGGAAGGGAGATAGAAGCAAGGT 277453 Query 76290 TACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTAC 76349 |||| ||||| | || | || | | || | | || || ||||| || ||||| | Sbjct 277454 TACAGACGGCGATTTCGTCAGGAGAAGTGTACTCGACGATTTCTGTGCAAAGGTTACTGC 277513 Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409 ||||||| || || | || |||||||| ||| ||||||| | || || || | | Sbjct 277514 ACTTGATGGTGCCCAAGTTCTGTTGGTTAGACTTGCTGTTACAGGCATCTTTGTACAACA 277573 Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCT 76468 | || || ||||| || | || || || ||||| | | ||| | | ||| ||| Sbjct 277574 TGTATGGGGTACCAGTCTCGGTTTGAGACTCAATAATGGCGTACCAAA-GCTTCTGAGCC 277632 Query 76469 TTTATTA-TAGATTTGT-ATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATT 76526 || || | | | | | | ||| | ||||||| | ||| | |||||| | Sbjct 277633 TTGATAACTTTACGGGCCAACCCTTTGCG--TTCATATGATTCATAAAGTGCTTCAAACT 277690 Query 76527 CATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCAC 76586 || ||||| || ||||| || || |||| | ||||| | | ||||| |||| Sbjct 277691 TTTCGCCCCAGCAGTCTTCCAACCCTGGCGCTTCACTTGGACAGAAGAGAGACCAGTCAC 277750 Query 76587 CATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTC 76646 ||| || || || |||||||| | ||| ||||| |||||| || | |||| Sbjct 277751 CATTGCTCTCCACACGCTTCATAAACAAGTCACAGATCCAGAGAGCATAGAACAAGTCTC 277810 Query 76647 GGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAG 76706 | | | ||| || || || |||||||| || ||||| ||||| || | ||||| | Sbjct 277811 GAGCGCGGTTTTCCTCTTTACCAGTATTCTTCTTGAGATCAAGGAATTCAAAGATATCTG 277870 Query 76707 AATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTA 76766 |||||||| || | || || || | | || || || || || ||||| ||||| | Sbjct 277871 CGTGCCATGGCTCCAAGTAGATAGCAAAGGCCCCGGGACGCTTGTTGCCTCCTTGATCCA 277930 Query 76767 TATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAG-ATGTACCA 76825 ||| | ||||||||||| | || | | ||| ||||| || || || | |||| || Sbjct 277931 CATAGCGAGCAGTGTTATTGAAGACACGAAGCATCGGAATGATTCCATTCGAATGT-CCG 277989 Query 76826 TTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATA 76870 || ||||||| ||| || || | |||||||| ||| |||| Sbjct 277990 TTGGTTCCAGCAATGTACGAACCGGAGGCACGAATCTTATGAATA 278034 Score = 86.0 bits (94), Expect = 9e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966 ||||| | |||||||| || ||||| || || || |||||| |||| | ||||| Sbjct 278122 GCACAACTCTTCAATGTCTCGTAGATTCCTTCAATTGAGTCATCCTTCATTGTGAGAAGG 278181 Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026 ||||| ||||| ||| ||||| ||||| || || || | ||||||||||| ||| Sbjct 278182 AAACATGAAGACAATTGCGGATGAGGTGTTCCGGCGTTGAAGAGAGTAGGAGATGCGTGA 278241 Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGT 77058 ||||| || |||||| || || | || ||| Sbjct 278242 GTGAAGTATCGTTCAGAGAGGAGGTGGTCTGT 278273 >seq157 Length=558770 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009 || ||| || || || |||||||| ||||| | |||||| || || | | |||| || Sbjct 323021 CACCTGGAAGCCATAGAAACATCTCGCTTCTGGAATCTGAACATCATTGGAGAATCTCTC 323080 Query 47010 AGACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAA 47068 | |||| ||||||||||| || || || |||||| || || || | || || || Sbjct 323081 A-ACAAGGTTCTCATTCACGATGCCGTCCGAAGCAGCGAAGAAGGCAAGGACGTGGGAAA 323139 Query 47069 TAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTA 47128 ||| |||| || || | | || || | |||||| | |||||| || | |||| Sbjct 323140 CAAAGAATTTCTCGTCATCACTGAGCTTCTCCCAGTCGCTAGCATCTTTGGACAAGTCTA 323199 Query 47129 CTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCA 47177 |||||||| | |||||||| || || |||||||| || ||||| | ||| Sbjct 323200 CTTCTTCAACAGTCCAGAAGGATGCTTCTGCTTTCTTGTACATTTGCCA 323248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930505595840