Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq256 98.7 6e-16 >seq256 Length=68436 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || || || | ||| |||||| || || ||||||||||| Sbjct 65866 CCGCCACGAAGACGGAGAACGAGATGAAGAGTGGATTCTTTTTGAATATTGTAGTCGGAA 65925 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | || || || ||||||||||| || |||||||| ||| Sbjct 65926 AGGGTTCGTCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGTTGCTGGTCTGGGGGG 65985 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||| || || || |||| | | | || | ||| | || || ||| Sbjct 65986 ATACCCTCCTTATCTTGAATTTTGGTTTTTACTTGGTCGATGGTATCCGAGGACTCTACG 66045 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||||||||||||||| || || || ||||| ||||| Sbjct 66046 TCCAAGGTGATGGTTTTGCCGGTGAGTGTCTTTACGAAGATTTGCAT 66092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323027916421760