Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq6423 147 2e-31 >seq6423 Length=1074 Score = 147 bits (162), Expect = 2e-31 Identities = 137/172 (80%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 14529 GGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATC--ACTTCAGAAGAAG 14586 || |||||||||||||||||| |||| ||||| ||||| |||||| | || |||| | Sbjct 177 GGTACAGTAAAATGGTTTAACTCAGAAAAAGGTTTTGGATTTATCGAAGTT--GAAGGTG 120 Query 14587 GCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATG 14646 | || ||| | |||| |||||||| ||||||||| || || |||||| | ||||| | Sbjct 119 GAAACGATGTATTCGTACACTTCTCTGCAATCCAAGGCGACGGTTTCAAAACTCTTGAAG 60 Query 14647 AAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCAAGC 14698 ||||||||||||| | |||||| |||||||||||| | ||||| | ||||| Sbjct 59 AAGGTCAAAAAGTAGTATTTGACGTTGAAGAAGGTAACCGTGGACCACAAGC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48448127396216