Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq575 183 7e-41 seq54 178 3e-39 seq218 158 3e-33 seq256 150 4e-31 seq1775 134 3e-26 seq645 131 4e-25 seq1465 114 3e-20 seq770 114 3e-20 seq1592 100 7e-16 seq325 91.5 3e-13 >seq575 Length=50698 Score = 183 bits (202), Expect = 7e-41 Identities = 170/216 (79%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||| | |||||||| |||||||| |||||||| || || || || | | || || Sbjct 22924 AAGTACCAAGTGTAATGTTGATTCTTTTTGAATATTGTAATCGGAAAGTGAACGTCCATC 22983 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||||| ||||| |||||||| |||| | |||||||| || || |||||||||||||| Sbjct 22984 TTCTAACTGTTTACCAGCAAATATTAAACGTTGTTGATCCGGGGGGATTCCTTCTTTATC 23043 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||| ||| |||| || || || | |||||||||| ||| || |||| ||||| || Sbjct 23044 TTGAATTTTTTCTTTGACTTTATCGATGGTATCGCTACTTTCAACTTCTAAAGTAATGGT 23103 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||||||||||||||| ||||| || ||||| || Sbjct 23104 TTTACCAGTAAGTGTTTTAACAAAAATTTGCATGTT 23139 >seq54 Length=215934 Score = 178 bits (196), Expect = 3e-39 Identities = 337/492 (68%), Gaps = 8/492 (2%) Strand=Plus/Plus Query 269076 GaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCGCCTTAC---GGAGAAA 269132 |||||||| | || |||||||| |||||| ||||| | ||| | ||| Sbjct 101839 GAAAAAAAGCGGATTGGGCTCTTCGATGGATTTCCGATAAGGAATCTTCATTTGCTGAAC 101898 Query 269133 GGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCT 269192 | | || || ||||||||||| ||||| ||||||||||| || |||| || | |||| Sbjct 101899 GTCTTGTAGCGTTTGCCGCTGTTGAAGGAATATTCTTTTCTGGAGCTTTCGCGTCAATCT 101958 Query 269193 TTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCA 269252 ||||||| ||||||||||| | ||||||||||||||||| || |||||| | || Sbjct 101959 TTTGGTTAAAGAAAAGAGGAATGATGCCAGGATTAACTTTTTCCAACGAACTAATTTCTC 102018 Query 269253 GGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACA 269312 | || ||||| || || || || || || ||| | ||||| ||| || || | ||| Sbjct 102019 GAGATGAAGGATTGCATTGTGATTTTGCATGTCTCTTATTCACTCATCTTCGTGCAC--- 102075 Query 269313 AACCTTCTCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAAT 269372 |||| | | | | ||| | | ||||||| ||| ||| | ||||| ||||| Sbjct 102076 GACCTCCAACAAAAACTGTAGAAGCTATTATAGCGGAAGCGGTTACAATAGAACAAGAAT 102135 Query 269373 TTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAAT 269432 || |||| ||||| || | | || | || |||||||| || | |||| | ||| Sbjct 102136 TTTTAACAGAAGCATTACCAGTTAATTTAATTGGTATGAACGCGAATTTAATGAAAAAAT 102195 Query 269433 ATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAA-AATATAAC 269491 ||||| | || ||| |||||||||| | ||| | | ||| || |||| ||||| Sbjct 102196 ATATTGAATTTGTAGCTGATAGATTATTAGTGGCACT-TGGTGGAGCAAAATTGTATAAT 102254 Query 269492 GTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTC 269551 || ||||| ||| ||||||||| || ||| ||||||| | |||||||| Sbjct 102255 TCAGAGAATCCTTTTGATTTTATGGATTTAATTAGTTTACAAGGTAAAACAAATTTCTTT 102314 Query 269552 GAGAAGCGGGTA 269563 || || || ||| Sbjct 102315 GAAAAACGCGTA 102326 Score = 145 bits (160), Expect = 2e-29 Identities = 204/281 (73%), Gaps = 9/281 (3%) Strand=Plus/Plus Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801 ||||||||| |||||| ||||| ||||||||||| || ||||| || || || | || Sbjct 101423 ATGTACAAAAAGGCCGAAGCTTCATTTTGGACTGTTGAGGAAGTTGACCTTTCCAAGGAT 101482 Query 268802 TTAATAGATTGGAA----AAATTTAAAACCA-GAAGAAAGAAGATTTATATCTTATATTC 268856 | | |||||| | ||| |||| | | ||||||| | ||||| ||| | || Sbjct 101483 ATGAATGATTGGGAGTATAAACTTAA--CGATGAAGAAAAATTCTTTATTTCTCACGTTT 101540 Query 268857 TTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT-GT 268915 | || || ||||| | |||||||| || || |||||| |||| || | ||| | || Sbjct 101541 TGGCCTTCTTTGCCGCCTCGGATGGTATTGTCAATGAAAATTTAGTGGA-ACGTTTTAGT 101599 Query 268916 CAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAAT 268975 | || || || ||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct 101600 AATGAAGTCCAAATTCCAGAAGCAAGATGTTTTTATGGATTTCAGATCATGATCGAAAAT 101659 Query 268976 ATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT 269016 || |||||||| |||||| || || || ||| ||||||| Sbjct 101660 ATCCATTCAGAAATGTACTCCCTCTTGATTGATTCTTATAT 101700 >seq218 Length=131350 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | ||||| ||||| | || |||||||| ||||||||||| || Sbjct 42240 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 42299 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||| | || ||||| | |||||| ||||| || |||| | |||||||| ||| Sbjct 42300 GACAAAGTACGCCCATCTTCCAATTGTTTACCAGCGAAGATTAAGCGTTGTTGATCTGGA 42359 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| ||||| |||||||||||||| || | || | ||||| | | || Sbjct 42360 GGAATTCCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCAATAGTATCATTGGACTCG 42419 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || || |||||||| || || || ||||| ||||| Sbjct 42420 ACTTCAAGGGTAATGGTTTTCCCAGTAAGGGTCTTGACGAATATTTGCAT 42469 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | ||||| ||||| | || |||||||| ||||| |||||||| Sbjct 42012 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTGGATTCTTTTTGAATGTTATAGTCT 42071 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | ||| ||||||| |||||| ||||| || || | | |||||||| || Sbjct 42072 GACAATGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGG 42131 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| |||||||||||||| || | |||| |||||| | ||| Sbjct 42132 GGGATACCTTCTTTATCTTGAATCTTTGCTTTAACTTGGTCTATGGTATCAGAGGACTCT 42191 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || ||||| || || ||||| || || || ||||| Sbjct 42192 ACTTCAAGAGTGATTGTTTTACCGGTCAGCGTTTTAACGAAAATTTGCAT 42241 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | ||||| ||||| | || |||||||| ||||||||||| || Sbjct 41784 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 41843 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | ||| ||||||| |||||| ||||| || || | | |||||||| ||| Sbjct 41844 GACAACGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGA 41903 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| |||||||| | |||||| | |||| |||||| | || Sbjct 41904 GGGATACCTTCTTTATCTTGAATCTTCGTTTTTACTTGATCTATGGTATCAGAGGACTCG 41963 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| || || || || || || || ||||| Sbjct 41964 ACTTCAAGAGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 42013 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||| ||||| | ||||||||||| ||||||||||| || |||| ||| | || || Sbjct 41345 AAGTACGAGATGGAGAGTAGATTCTTTTTGAATATTATAATCCGATAAAGTACGGCCATC 41404 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| | |||||| ||||| || || | | || ||||| ||||| || ||||| ||||| Sbjct 41405 TTCCAATTGTTTACCAGCGAAGATCAAGCGTTGCTGATCTGGAGGAATACCTTCCTTATC 41464 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||||||||| || | |||| |||||| | || || || || ||||| || Sbjct 41465 TTGAATCTTTGCTTTAACTTGGTCTATGGTATCAGAGGACTCAACTTCAAGGGTAATTGT 41524 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || || || || ||||| Sbjct 41525 TTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 41557 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| | |||||| ||||| | || ||||| || |||||||||||||| Sbjct 41556 ATACCACCTCTTAAACGAAGTACGAGATGGAGAGTTGATTCCTTTTGAATATTATAGTCC 41615 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| ||| | || ||||| | |||||| || || || || | | |||||||| || Sbjct 41616 GATAAAGTACGGCCATCTTCCAATTGTTTACCGGCGAAGATCAAGCGTTGTTGATCTGGG 41675 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| ||||| |||||||||||||| || | |||| |||||| | || Sbjct 41676 GGGATACCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCTATGGTATCAGAGGACTCG 41735 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| || ||||| || || || || || || || ||||| Sbjct 41736 ACTTCAAGAGTAATTGTTTTACCGGTGAGAGTCTTGACGAAAATTTGCAT 41785 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| || || ||||| || | ||||| ||||| | || || ||||||||||| || Sbjct 42461 TATTTGCATACCACCTCTAAGACGGAGTACGAGATGAAGAGTTGACTCTTTCTGAATGTT 42520 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 || ||||||| | | |||||||| | |||||||| ||||| |||| | ||||| Sbjct 42521 GTAATCAGATAAGCTACGTCCGTCTTCCAACTGTTTTCCGGCAAAGATTAAGCGTTGTTG 42580 Query 104443 ATCAGGAGGTATTCCT 104458 ||| ||||| |||||| Sbjct 42581 ATCCGGAGGAATTCCT 42596 >seq256 Length=68436 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | ||| || ||||| |||||||| |||||||| || |||| || || Sbjct 65652 AAGCACCAAATGAAGTGTTGACTCTTTTTGAATATTGTAGTCAGAAAGGGTTCGTCCATC 65711 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || |||||||| || || ||||| || | || ||||| || || || |||||||| || Sbjct 65712 CTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGAATACCTTCTTTGTC 65771 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||||||||||| | || | ||||||| || || || || | ||||| || Sbjct 65772 TTGAATCTTTGCTTTTACTTGATCGATGGTATCGGAAGACTCAACTTCCAAAGTAATGGT 65831 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| ||||| || ||||| Sbjct 65832 TTTTCCAGTTAGAGTTTTAACAAAAATTTGCAT 65864 Score = 150 bits (166), Expect = 4e-31 Identities = 174/233 (75%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||||||||| | || || ||||| ||||| ||||| || || || || | |||||| Sbjct 66108 AAGTACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCTGAAAGGGTACGACCGTC 66167 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| |||||||| ||||| ||||| || | || || || || || ||||||||||| || Sbjct 66168 TTCAAGTTGTTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGGGGAATTCCTTCTTTGTC 66227 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||| |||||||| || | || | || ||| || ||| || || || || || || Sbjct 66228 TTGAATTTTTGCTTTAACTTGGTCAATAGTGTCGGAAGATTCAACTTCAAGGGTGATTGT 66287 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACAGTATTTATTA 104579 ||| || ||||| ||||| || || || ||||| | ||| | |||| |||| Sbjct 66288 CTTTCCGGTAAGGGTTTTAACGAAGATTTGCATGAT-TGTTAATTATTAATTA 66339 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| || || ||||| || || ||||| | ||| ||||| | ||| || ||| Sbjct 65440 GTTGATTCTTTTTGGATGTTATAATCCGAAAGAGTACGACCATCTTCCAATTGCTTACCA 65499 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | | || ||||| ||||| || || |||||||| ||||| || | ||| Sbjct 65500 GCGAAAATCAAACGTTGCTGATCTGGAGGGATACCCTCTTTATCTTGAATTTTGGTTTTA 65559 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || | || | |||||| | ||| ||||| || ||||| |||||||||||||||||| Sbjct 65560 ACCTGATCAATGGTATCAGATGATTCGACCTCAAGGGTAATCGTCTTACCAGTAAGTGTT 65619 Query 104543 TTTACAAATATCTGCAT 104559 |||||||| || ||||| Sbjct 65620 TTTACAAAAATTTGCAT 65636 >seq1775 Length=41804 Score = 134 bits (148), Expect = 3e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 104340 TTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTC 104399 |||| || | ||| ||||||| ||| || | ||| | || || || || |||| || | Sbjct 13605 TTAGTCTCAATACCAGATGTATTGTGGAATGTTTTTTTATCTTGTAATCCGATAACGTAC 13664 Query 104400 TACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTT 104459 || ||||| ||| | |||||||||| || || |||||||| |||||||| |||| Sbjct 13665 GGCCATCTTCAAGTAACATACCAGCAAAAACTAATCTTTGTTGATCTGGAGGTATCCCTT 13724 Query 104460 CTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTG 104519 ||||||||||||| ||| |||||| || | | ||||| ||| | || ||||||| Sbjct 13725 CTTTATCCTGAATTTTTTCTTTTAGGTTATAAATTGTATCACTAAAATTTAATTCTAGTG 13784 Query 104520 TAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTG 104556 | ||||| |||||||| | ||| || || ||||| || Sbjct 13785 TTATAGTTTTACCAGTTAATGTATTAACGAATATTTG 13821 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 |||| |||||| ||||| || | || || || || |||| || | | | ||||| ||| Sbjct 18692 AGATTTAATGTGGATTCATTTTTTATCTTGTAATCCGATAACGTACAATCATCTTCAAGT 18751 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 |||||||| |||||| | |||||| | ||||||| ||||||||||||||||| Sbjct 18752 AACATTCCAGCATAAATTAATTTTTGTTGACCTAGAGGTATCCCTTCTTTATCCTGAATT 18811 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 ||| ||||||| | | | ||||| ||| || || || ||||||| | |||||| Sbjct 18812 TTTTCTTTTACGTAATAAATTGTATCACTAAAATCAACGCATATTGTAATACTTTTACCA 18871 Query 104534 GTAAGTGTTTTTACAAATATCTG 104556 || | ||||| || ||||| || Sbjct 18872 GTTAATGTTTGAACGAATATTTG 18894 >seq645 Length=46104 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | ||| |||||||| ||||| | ||| | ||||| || |||| ||| || Sbjct 29514 ATTCCTCCACGTAGTCTAAGTACAAGATGAATTGTGCACTCTTTTTGGATATAATAATCT 29573 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | || ||||||| ||| | ||||||||||| || | |||||||||||| Sbjct 29574 GACAAGGTACGTCCTTCTTCTAATTGCGTGCCAGCAAAAATAAGGCGTTGTTGATCAGGA 29633 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| || | |||||| ||| | || || | ||||| || | | Sbjct 29634 GGAATTCCTTCTTTGTCATAAATCTTACATTTAAGTTTGTCAATTGTATCACTCGAAGCC 29693 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTG 104556 ||| | ||| | || || ||||| |||||||| ||||||| ||| Sbjct 29694 GTCTCCAATGTTAATGTTTTTCCAGTTAGTGTTTTCACAAATACCTG 29740 >seq1465 Length=43607 Score = 114 bits (126), Expect = 3e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 ||||| ||||||||||| | || |||||||| ||||| || |||||||| || |||||| Sbjct 26639 TGTTTGCCAGCAAAAATCAATCTTTGTTGATCTGGAGGGATACCTTCTTTGTCTTGAATC 26698 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 |||| || || | ||| | ||||| || ||| || || || |||||||| || || Sbjct 26699 TTTGTCTTGACTTGTTCAATTGTATCAGAAGATTCAACTTCAAGAGTAATAGTTTTCCCG 26758 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 || || || |||||||| |||||||| Sbjct 26759 GTGAGGGTCTTTACAAAAATCTGCAT 26784 >seq770 Length=40003 Score = 114 bits (126), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| |||||||| ||||| || ||||| |||| ||||||||||| || Sbjct 15282 ATCCCACCACGTAGTCTAAGTACAAGATGCAACGTAGACTCTTCTTGAATATTATAATCT 15223 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| |||| | || || || | ||| || ||||||||||| | | || || |||||| Sbjct 15222 GATAAAGTTTTTCCATCCTCCAATTGCTTACCAGCAAAAATAATACGTTGCTGGTCAGGA 15163 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| | || | ||| | ||| | | || | || ||||| | || Sbjct 15162 GGAATGCCTTCTTTTTTCTCGACCTTAGATTTAATCATATCAATAGTGTCGCTTGAATCA 15103 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | ||||| ||| || || || || | |||||| ||||| Sbjct 15102 AAATCTAGGATAACTGTTTTTCCGGTCAATGTTTTCACAAA 15062 >seq1592 Length=32188 Score = 100 bits (110), Expect = 7e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 104378 ATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTC 104437 ||||| || ||| || ||| | || ||||| ||||| || ||||||||||||| || Sbjct 12452 ATATTGTAATCACTTAAAGTACGGCCATCTTCAAGTTGCTTACCAGCAAAAATTAATCTT 12511 Query 104438 TGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTA 104497 |||||||| || ||||| |||||||| || ||| |||| ||||| | || | ||| Sbjct 12512 TGTTGATCTGGTGGTATACCTTCTTTTTCAGTAATTTTTGTTTTTAATTGATCAATTGTA 12571 Query 104498 TCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || ||| || || || | ||| | ||| || ||||| | |||||| || Sbjct 12572 TCACTAAACTCGACTTCAATTGTTAGAGTTTTTCCAGTTAATGTTTTAAC 12621 >seq325 Length=113037 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 |||||||| |||||||| ||| | || | | ||||||| ||| ||||||||||| Sbjct 80829 TCTTTCTGGATATTATAATCACTCAAGGTACGCTCATCTTCTAATTGACTTCCAGCAAAA 80888 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | || |||||| || |||||||| || || || ||| |||| |||| | Sbjct 80889 ATAAAACGTTGACTATCAGGGGGAATTCCTTCCTTGTCTTGGATC-TTGCATTTAACTAG 80947 Query 104489 TCT-ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | |||||| | |||||||| | || | || || || || ||||||||||| Sbjct 80948 GCTGATGGTATCAGACGACTCTACCTCCAAGGTTACCGTTTTTCCGGTTAGTGTTTTTAC 81007 Query 104548 AAATATCTGCAT 104559 ||||| |||||| Sbjct 81008 AAATACCTGCAT 81019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151233233338768