Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_015250.1 Length=159801 Score E Sequences producing significant alignments: (Bits) Value seq3016 86.0 6e-12 >seq3016 Length=3907 Score = 86.0 bits (94), Expect = 6e-12 Identities = 115/155 (74%), Gaps = 4/155 (3%) Strand=Plus/Minus Query 68224 TGGCTCCCCAGGTACGGTTCGAACGTACGACCAACGCAGTAACAGTGCGTCGCTCTACCA 68283 ||||||| ||||| | |||||| |||||||||| |||||| || ||||||||| Sbjct 1174 TGGCTCCGAAGGTAGGACTCGAACCTACGACCAACCGGTTAACAGCCGGTTGCTCTACCA 1115 Query 68284 ACTGAGCTACTGAGGAATAATCTGGT-GCCGTCACTAGGATTCGAACCCAGGACCTGACG 68342 |||||||||| |||||| | |||| | | | | | ||| ||||||| ||||| ||| Sbjct 1114 -CTGAGCTACTTCGGAATATTATGGTGGGCCTAAAT-GGACTCGAACCATCGACCTCACG 1057 Query 68343 ATTACAAATCGCCTGCTCT-ACCATCTGAGCTATA 68376 ||| | || ||||| |||| |||||||||| Sbjct 1056 CTTATCAGGCGTGCGCTCTAACCAGCTGAGCTATA 1022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511163652633760