Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq3016 82.4 2e-11 >seq3016 Length=3907 Score = 82.4 bits (90), Expect = 2e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 3479 AGCGGGTAAGCGGATTCGAACCGCTGACAACAGCTTGGAAGGCTGCAGTTTTACCTCTAA 3538 ||||||| | |||| |||||||| |||| ||||||||||||||| |||||||| ||| Sbjct 1002 AGCGGGTGATCGGAATCGAACCGACGACATCAGCTTGGAAGGCTGAGGTTTTACCATTAA 943 Query 3539 ACTATACCCGCAA 3551 |||| |||||||| Sbjct 942 ACTACACCCGCAA 930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152629304854056