Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq9243 98.7 2e-15 >seq9243 Length=648 Score = 98.7 bits (108), Expect = 2e-15 Identities = 185/270 (69%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 133941 CTGCATGGAATGTTGGTGAACTAGATAAAATGACTTTGCCACCATGTCATTGCTTTAGTC 134000 |||| |||||| | ||| | ||| | ||| |||| ||||| ||||||| ||| | Sbjct 648 CTGCGTGGAATCCAGCAGAAGTTGATGAGATGGCTTTACCACCTTGTCATTCATTTTTCC 589 Query 134001 AATTCTTCGTAAATGACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTAT 134060 |||| | ||| || || || | || ||| | |||||| | || ||| ||| Sbjct 588 AATTTTATGTAGCGGAAGGGAAACTTTCTTGTCAATTGTATCAAAGAAGTGCCGATGTAT 529 Query 134061 TCTTAGGAGTACCATTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAG 134120 | |||||||| || ||||| || ||||| ||| |||| |||| ||| | | ||||| | Sbjct 528 TTTTAGGAGTGCCGTTCAATATCGCTTCTTATGCATTGTTAACACATTTAATTGCACATG 469 Query 134121 TTTGTGGGTTAGAAGTTGGTGAGTTTGT--ATGGATGGGTGGAGATGTTCACATTTATAA 134178 ||||||||||| |||||||| || || || | | ||||||| || || ||| Sbjct 468 AATGTGGGTTAGATGTTGGTGAATTCGTTCATAGCT--TTGGAGATACACATATCTATTT 411 Query 134179 AAATCACGTAGAAGCAGTTCAGGAACAACT 134208 |||||| |||| ||| | ||||| || Sbjct 410 AAATCATTTAGAGCAAGTAAATGAACAGCT 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147425779591608