Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq54 206 5e-48 seq575 152 9e-32 seq218 149 1e-30 seq1465 134 2e-26 seq256 131 3e-25 seq1592 125 1e-23 seq1775 122 2e-22 seq770 100 5e-16 seq1727 95.1 2e-14 seq566 86.0 1e-11 seq325 84.2 4e-11 >seq54 Length=215934 Score = 206 bits (228), Expect = 5e-48 Identities = 358/509 (70%), Gaps = 11/509 (2%) Strand=Plus/Minus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| || || || || |||||| || || |||||||| |||| ||| ||||| Sbjct 102341 TTTTTGATAATCTGATACGCGTTTTTCAAAGAAATTTGTTTTACCTTGTAAACTAATTAA 102282 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAA-TACATATA 38949 || |||||||||||| ||||| | | |||||| ||||| |||| | ||| | | || Sbjct 102281 ATCCATAAAATCAAAAGGATTCTCTGAATTATACAATTTTGCTCC-ACCAAGTGCCACTA 102223 Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATT-AATTCACAATTCATACCCAAT 39008 |||||||||| || |||||||||| ||||| | |||| ||||| | |||||||| | | Sbjct 102222 ATAATCTATCAGCTACAAATTCAATATATTTTTTCATTAAATTCGC-GTTCATACCAATT 102164 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagctt--gtttaa 39066 || |||| ||||||||| || | |||||||| ||||||| || |||| | | | Sbjct 102163 AAATTAACTGGTAATGCTTCTGTTAAAAATTCTTGTTCTATTGTAACCGCTTCCGCTATA 102104 Query 39067 ttatcataattatattattttttgataatttatatttaatatgattcgcatataGTAAAC 39126 || | | || | | ||| ||| | || |||| | | ||| || | || Sbjct 102103 ATAGCTT--CTACAGTTTTTGTTGGAGGTCGTGCACGAAGATGAGT-GAATA-AG-AGAC 102049 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 |||||||||| ||| || ||||| || | ||| || | ||| || ||||||||||| Sbjct 102048 ATGCAAAATCACAATGCAATCCTTCATCTCGAGAAATTAGTTCGTTGGAAAAAGTTAATC 101989 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 ||||||| | |||||| || || | |||||| ||||| || ||| | ||||||||||| Sbjct 101988 CTGGCATCATTCCTCTTTTCTTTAACCAAAAGATTGACGCGAAAGCTCCAGAAAAGAATA 101929 Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306 | || || ||| ||||| |||| | | | | |||| ||| | ||| ||| Sbjct 101928 TTCCTTCAACAGCGGCAAACGCTACAAGACGTTCAGCAAATGAAGATTCCTTATCGGAAA 101869 Query 39307 TCCAATTTATGGCCCAATCTGCttttttt 39335 |||| | |||||||| ||||||||| Sbjct 101868 TCCATCGAAGAGCCCAATCCGCTTTTTTT 101840 Score = 109 bits (120), Expect = 1e-18 Identities = 184/262 (70%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 39417 GAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCT 39476 || |||||||| ||||| | | ||| || || |||||| |||||| |||||| Sbjct 101679 GAGTACATTTCTGAATGGATATTTTCGATCATGATCTGAAATCCATAAAAACATCTTGCT 101620 Query 39477 TCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCA 39536 |||| | || ||||| | || ||||| |||||||| ||| ||||||||||| Sbjct 101619 TCTGGAATTTGGACTTCATTACTAAAACGTTCCACTAAATTTTCATTGACAATACCATCC 101560 Query 39537 GATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTT 39596 || || || ||||| || ||||| | |||||| |||||| | ||| |||| ||| Sbjct 101559 GAGGCGGCAAAGAAGGCCAAAACGTGAGAAATAAAGAATTTTTCTTCATC-GTTAAGTTT 101501 Query 39597 ----TCCCAA-GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATG 39651 |||||| |||| | ||| || || | || ||||| || | |||||||| || | Sbjct 101500 ATACTCCCAATCATTC-ATATCCTTGGAAAGGTCAACTTCCTCAACAGTCCAAAATGAAG 101442 Query 39652 CTACGGATTTTTTATACATTTG 39673 || ||| ||||| |||||||| Sbjct 101441 CTTCGGCCTTTTTGTACATTTG 101420 >seq575 Length=50698 Score = 152 bits (168), Expect = 9e-32 Identities = 168/223 (75%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 171860 TACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATC 171919 ||| || ||||| || | ||||| |||||| ||||| || | || ||| | || || Sbjct 22927 TACCAAGTGTAATGTTGATTCTTTTTGAATATTGTAATCGGAAAGTGAACGTCCATCTTC 22986 Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 || |||||||||||||| ||||| | ||||| || || || ||||||||||||||||| Sbjct 22987 TAACTGTTTACCAGCAAATATTAAACGTTGTTGATCCGGGGGGATTCCTTCTTTATCTTG 23046 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 ||||| | ||| || ||| || ||||| ||| ||||||| |||||||||||| Sbjct 23047 AATTTTTTCTTTGACTTTATCGATGGTATCGCTACTTTCAACTTCTAAAGTAATGGTTTT 23106 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAAAAA 172082 |||||| | |||||||| || || ||||| | ||| ||||| Sbjct 23107 ACCAGTAAGTGTTTTAACAAAAATTTGCATGT--TTAAAAAAA 23147 >seq218 Length=131350 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||||||||||||| Sbjct 41784 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 41843 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || || |||||||||||||| || || || | ||||| || || Sbjct 41844 GACAACGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGA 41903 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||| || || ||||||| | | ||| ||||| || || || Sbjct 41904 GGGATACCTTCTTTATCTTGAATCTTCGTTTTTACTTGATCTATGGTATCAGAGGACTCG 41963 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| |||||||| || | || || | ||| || ||||| Sbjct 41964 ACTTCAAGAGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 42013 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||||||||||||| Sbjct 42240 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTTGATTCTTTTTGAATATTATAATCT 42299 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || ||||||||||||||||| || ||||| | ||||| || || Sbjct 42300 GACAAAGTACGCCCATCTTCCAATTGTTTACCAGCGAAGATTAAGCGTTGTTGATCTGGA 42359 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| |||||||| || || ||| || | | |||||||| || || Sbjct 42360 GGAATTCCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCAATAGTATCATTGGACTCG 42419 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || ||||||||||| ||||| | || || | |||||| ||||| Sbjct 42420 ACTTCAAGGGTAATGGTTTTCCCAGTAAGGGTCTTGACGAATATTTGCAT 42469 Score = 140 bits (154), Expect = 6e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | ||||| ||| ||||| ||| Sbjct 42012 ATACCACCTCTTAAACGGAGTACGAGATGGAGAGTGGATTCTTTTTGAATGTTATAGTCT 42071 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || || |||||||||||||| || || || | ||||| || || Sbjct 42072 GACAATGTACGACCATCTTCTAATTGTTTACCAGCGAAGATCAAGCGTTGTTGATCTGGG 42131 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || |||||||||||||| || || | |||| || || ||| ||||| || || || Sbjct 42132 GGGATACCTTCTTTATCTTGAATCTT-TGCTTTAACTTGGTCTATGGTATCAGAGGACTC 42190 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||| ||||| || |||||||| || | ||||||| ||| || ||||| Sbjct 42191 TACTTCAAGAGTGATTGTTTTACCGGTCAGCGTTTTAACGAAAATTTGCAT 42241 Score = 136 bits (150), Expect = 7e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||| || | ||| | ||| | ||||| ||||| |||||||||||| || Sbjct 41330 ACCACCCCGAAGACGAAGTACGAGATGGAGAGTAGATTCTTTTTGAATATTATAATCCGA 41389 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || | || ||||||||||||||||| || || || | || || || || || Sbjct 41390 TAAAGTACGGCCATCTTCCAATTGTTTACCAGCGAAGATCAAGCGTTGCTGATCTGGAGG 41449 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTCTA 172020 || ||||| |||||||| || || | |||| || || ||| ||||| || || || | Sbjct 41450 AATACCTTCCTTATCTTGAATCTT-TGCTTTAACTTGGTCTATGGTATCAGAGGACTCAA 41508 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||| || ||||| |||||||| || | || || | ||| || ||||| Sbjct 41509 CTTCAAGGGTAATTGTTTTACCGGTGAGGGTCTTGACGAAAATTTGCAT 41557 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | ||| | ||| | ||| | || || ||||||||| || Sbjct 41556 ATACCACCTCTTAAACGAAGTACGAGATGGAGAGTTGATTCCTTTTGAATATTATAGTCC 41615 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || | || |||||||||||||| || || || || | ||||| || || Sbjct 41616 GATAAAGTACGGCCATCTTCCAATTGTTTACCGGCGAAGATCAAGCGTTGTTGATCTGGG 41675 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || ||| || | | ||| ||||| || || || Sbjct 41676 GGGATACCTTCCTTATCTTGAATCTTTGCTTTAACTTGATCTATGGTATCAGAGGACTCG 41735 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||| |||||||| || | || || | ||| || ||||| Sbjct 41736 ACTTCAAGAGTAATTGTTTTACCGGTGAGAGTCTTGACGAAAATTTGCAT 41785 Score = 89.7 bits (98), Expect = 9e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||||||||| || | ||| | ||| | ||| | |||||| ||| || ||||| Sbjct 42468 ATACCACCTCTAAGACGGAGTACGAGATGAAGAGTTGACTCTTTCTGAATGTTGTAATCA 42527 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| ||| |||| ||||| ||||| || ||||| ||||| | ||||| || || Sbjct 42528 GATAAGCTACGTCCGTCTTCCAACTGTTTTCCGGCAAAGATTAAGCGTTGTTGATCCGGA 42587 Query 171960 GGTATTCCT 171968 || |||||| Sbjct 42588 GGAATTCCT 42596 >seq1465 Length=43607 Score = 134 bits (148), Expect = 2e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | || | ||| | ||| | ||| || ||||| |||||| Sbjct 26783 ATACCACCTCTTAAACGGAGCACGAGATGGAGAGTTGACTCCTTTTGGATATTGTAATCT 26842 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | ||| | || |||||||||||||| ||||| || || | || || || || Sbjct 26843 GACAAGGTACGTCCATCTTCCAATTGTTTACCGGCAAAGATCAAGCGTTGCTGATCCGGG 26902 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || |||||||| ||||| || || ||| || || || || |||||||| || || Sbjct 26903 GGAATGCCTTCTTTGTCTTGAATCTTCGCTTTAAC-TTGGTCAATGGTATCTGAGGACTC 26961 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||| |||||||| |||||||| || | || |||| ||| || ||||| Sbjct 26962 TACTTCAAGAGTAATAGTTTTACCGGTAAGAGTCTTAACGAAAATTTGCAT 27012 Score = 100 bits (110), Expect = 5e-16 Identities = 112/148 (76%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 ||||| ||||||||||| ||||| ||||| || || || || |||||||| ||||| || Sbjct 26639 TGTTTGCCAGCAAAAATCAATCTTTGTTGATCTGGAGGGATACCTTCTTTGTCTTGAATC 26698 Query 171984 TTATTTTTTACATTAGTT--ATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTAC 172041 || | || || | ||| || ||||| || ||||| ||||| |||||||| ||||| | Sbjct 26699 TTTGTCTTGAC--TTGTTCAATTGTATCAGAAGATTCAACTTCAAGAGTAATAGTTTTCC 26756 Query 172042 CAGTTAATGTTTTAATGAATATCTGCAT 172069 | || | || || | || |||||||| Sbjct 26757 CGGTGAGGGTCTTTACAAAAATCTGCAT 26784 >seq256 Length=68436 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | |||||| | ||||| ||| | ||| | |||||| ||| ||||||||| Sbjct 66091 ATACCTCCGCGAAGTCGAAGTACTAGATGAAGAGTTGACTCTTTTTGAATGTTATAATCT 66150 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | |||||| ||||| ||||| | | || ||||| || Sbjct 66151 GAAAGGGTACGACCGTCTTCAAGTTGTTTGCCAGCGAAAATAAGACGTTGCTGGTCTGGG 66210 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || ||||||||||| ||||| ||||| | |||| || || ||||| || || ||||| Sbjct 66211 GGAATTCCTTCTTTGTCTTGAATTTT-TGCTTTAACTTGGTCAATAGTGTCGGAAGATTC 66269 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || || || || || | ||||||| ||| || ||||| Sbjct 66270 AACTTCAAGGGTGATTGTCTTTCCGGTAAGGGTTTTAACGAAGATTTGCAT 66320 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || ||||| | || | |||||| |||||| || || Sbjct 65635 ATACCACCACGAAGACGAAGCACCAAATGAAGTGTTGACTCTTTTTGAATATTGTAGTCA 65694 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | |||| | || || | ||||||||| || ||||| | | || || || || Sbjct 65695 GAAAGGGTTCGTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGG 65754 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| || || |||||| | | || ||||| || || || Sbjct 65755 GGAATACCTTCTTTGTCTTGAATCTTTGCTTTTACTTGATCGATGGTATCGGAAGACTCA 65814 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||||||||| ||||||| ||||||| || || ||||| Sbjct 65815 ACTTCCAAAGTAATGGTTTTTCCAGTTAGAGTTTTAACAAAAATTTGCAT 65864 Score = 113 bits (124), Expect = 8e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| || | || || | || |||||||| |||||||| ||||| || | Sbjct 65455 ATGTTATAATCCGAAAGAGTACGACCATCTTCCAATTGCTTACCAGCGAAAATCAAACGT 65514 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || || || || || || ||||||||||| ||||| |||| || | | || ||| Sbjct 65515 TGCTGATCTGGAGGGATACCCTCTTTATCTTGAATTTTGGTTTTAACCTGATCAATGGTA 65574 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || || ||||| || || || ||||| || |||||||| | |||||| | || || ||| Sbjct 65575 TCAGATGATTCGACCTCAAGGGTAATCGTCTTACCAGTAAGTGTTTTTACAAAAATTTGC 65634 Query 172068 AT 172069 || Sbjct 65635 AT 65636 Score = 107 bits (118), Expect = 3e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | ||| || | || | ||| | ||| | ||||| |||||| || || Sbjct 65863 ATACCGCCACGAAGACGGAGAACGAGATGAAGAGTGGATTCTTTTTGAATATTGTAGTCG 65922 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | |||| | || || | |||||||||||| ||||| | | || ||||| || Sbjct 65923 GAAAGGGTTCGTCCATCCTCAAGTTGTTTACCAGCGAAAATGAGACGTTGCTGGTCTGGG 65982 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGT-TATAGTATCTGACGATTC 172018 || || || || |||||||| ||||| ||||||| || || || ||||| || || || Sbjct 65983 GGGATACCCTCCTTATCTTGAATTTTGGTTTTTAC-TTGGTCGATGGTATCCGAGGACTC 66041 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| || | || |||||||| || || | ||| || | ||| || ||||| Sbjct 66042 TACGTCCAAGGTGATGGTTTTGCCGGTGAGTGTCTTTACGAAGATTTGCAT 66092 >seq1592 Length=32188 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| || | || |||||||||||||| || | ||| | | ||||| ||||| | Sbjct 12407 CCACCCCTTAATCTTAATACTAAATGTAGCGTGGACTCAACACATATATTGTAATCACTT 12466 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 |||| || | || || | ||| |||||||||||||||||||| ||||| || |||||| Sbjct 12467 AAAGTACGGCCATCTTCAAGTTGCTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGT 12526 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || |||||||| || ||||| |||||| | | || ||||| | || ||| Sbjct 12527 ATACCTTCTTTTTCAGTAATTTTTGTTTTTAATTGATCAATTGTATCACTAAACTCGACT 12586 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 172056 || | || | ||||| |||||||||||||||| Sbjct 12587 TCAATTGTTAGAGTTTTTCCAGTTAATGTTTTAA 12620 >seq1775 Length=41804 Score = 122 bits (134), Expect = 2e-22 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | |||| ||||| | ||||| || | | ||| || || ||||| || Sbjct 13597 ACCACCAATTAGTCTCAATACCAGATGTATTGTGGAATGTTTTTTTATCTTGTAATCCGA 13656 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||| | || | || || | | |||||||||||| |||||| ||||| || || || Sbjct 13657 TAACGTACGGCCATCTTCAAGTAACATACCAGCAAAAACTAATCTTTGTTGATCTGGAGG 13716 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||| ||||||||||| || ||||| | ||||| ||| || ||||| | | || Sbjct 13717 TATCCCTTCTTTATCCTGAATTTTTTCTTTTAGGTTATAAATTGTATCACTAAAATTTAA 13776 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| || || ||||||||||||||||| |||| |||||| || Sbjct 13777 TTCTAGTGTTATAGTTTTACCAGTTAATGTATTAACGAATATTTG 13821 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 171930 CCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTT 171989 |||||| |||||||| | ||||| | | ||||| ||||||||||| || ||||| | | Sbjct 18758 CCAGCATAAATTAATTTTTGTTGACCTAGAGGTATCCCTTCTTTATCCTGAATTTTTTCT 18817 Query 171990 TTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAAT 172049 ||||| | | || ||||| | || || || ||||| |||||||||||||| Sbjct 18818 TTTACGTAATAAATTGTATCACTAAAATCAACGCATATTGTAATACTTTTACCAGTTAAT 18877 Query 172050 GTTTTAATGAATATCTG 172066 |||| || |||||| || Sbjct 18878 GTTTGAACGAATATTTG 18894 >seq770 Length=40003 Score = 100 bits (110), Expect = 5e-16 Identities = 164/235 (70%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||| | ||| | ||| || |||| ||||| ||||||||||||| Sbjct 15282 ATCCCACCACGTAGTCTAAGTACAAGATGCAACGTAGACTCTTCTTGAATATTATAATCT 15223 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| | | | || |||||||| |||||||||||||| | | || |||||||| Sbjct 15222 GATAAAGTTTTTCCATCCTCCAATTGCTTACCAGCAAAAATAATACGTTGCTGGTCAGGA 15163 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| | | | ||| ||| | || ||||| || || || Sbjct 15162 GGAATGCCTTCTTTTTTCTCGACCTTAGATTTAATCATATCAATAGTGTCGCTTGAATCA 15103 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTAT 172074 | ||||| ||| ||||| || || |||||||| | || || | | |||||| Sbjct 15102 AAATCTAGGATAACTGTTTTTCCGGTCAATGTTTTCA-CAAAATTTCCCTTTTAT 15049 >seq1727 Length=26445 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || | ||| | ||| | | | ||||||||||| | Sbjct 20386 ATACCACCTCTTAGACGGAGCACGAGATGAAGAGTTGATTTATCCCTAATATTATAATGT 20327 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| ||| || |||| ||||||||||||||| || || | || || | || Sbjct 20326 GTCAAAGTATGTTTATCTTCCAGTTGTTTACCAGCAAAGATCAAACGTTGCTGATTTGGA 20267 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || | |||||||||||||| ||| | ||||| || | | | ||||| || | || Sbjct 20266 GGAGTGCCTTCTTTATCTTGAATTATGTTTTTCACTTCTTTAACTGTATCAGAGGCATCA 20207 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | | ||| ||||| ||| ||| ||||||| || || || || Sbjct 20206 ACTTCAATGGCAATTGTTTTGCCACTTACAGTTTTAACAAAAATTTGTAT 20157 >seq566 Length=43303 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || |||||||||||||| ||||| || | |||||||||||| Sbjct 34499 ACCACCTCTTAATCTTAATACTAAATGTACAGTAGATTCATGTTGTATATTATAATCTTC 34440 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || || || || | ||||||||| || | || || | ||||| || || || Sbjct 34439 TAAAGTGCGATCATCTTCAAGTTGTTTACCGGCCATAAGCAAACGTTGTTGATCTGGAGG 34380 Query 171962 TATTCCTTCT 171971 ||| |||||| Sbjct 34379 TATACCTTCT 34370 >seq325 Length=113037 Score = 84.2 bits (92), Expect = 4e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||||||||| || | || || || || ||||| | ||||||||||| || | Sbjct 80838 ATATTATAATCACTCAAGGTACGCTCATCTTCTAATTGACTTCCAGCAAAAATAAAACGT 80897 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG--TTATAG 172005 || ||||| || |||||||| || ||||| || || ||| || ||| | || | Sbjct 80898 TGACTATCAGGGGGAATTCCTTCCTTGTCTTGGATCTTGCATTTAAC--TAGGCTGATGG 80955 Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065 |||| ||||| ||||| || | || | ||||| || |||| |||||| | |||| || Sbjct 80956 TATCAGACGACTCTACCTCCAAGGTTACCGTTTTTCCGGTTAGTGTTTTTACAAATACCT 81015 Query 172066 GCAT 172069 |||| Sbjct 81016 GCAT 81019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905009326216800