Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizophagus_20irregularis_20[genbank_20GCA_5F001593125.1_202016-03- 16] 11,196 sequences; 125,353,551 total letters Query= NC_021779.1 Length=59746 Score E Sequences producing significant alignments: (Bits) Value seq11023 805 0.0 >seq11023 Length=509 Score = 805 bits (892), Expect = 0.0 Identities = 484/509 (95%), Gaps = 0/509 (0%) Strand=Plus/Plus Query 46210 CCCGATCGCCGCGCCCACACGGCCAATAACAAACAGCACACCGCAGATAATCAATACAAA 46269 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1 CCCGATCGCCGCGCCCACACGGCCAATGACAAACAGCACACCGCAGATAATCAATACAAA 60 Query 46270 CAGCGTTAGCGCAGCGATCTTCTTCATGGTGGCCCCTTTATTCCTTCGGTGGATTTGATT 46329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CAGCGTTAGCGCAGCGATCTTCTTCATGGTGGCCCCTTTATTCCTTCGGTGGATTTGATT 120 Query 46330 GGTGGCGATTTAGCCAGATGACAATCCCGGCAGTATAATTGATCACGCCGAGCAACTCCC 46389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGTGGCGATTTAGCCAGATGACAATCCCGGCAGTATAATTGATCACGCCGAGCAACTCCC 180 Query 46390 TAACCCTTTGGTCATGCGTTGGCAGGTTGACACCCTCCACGACCTTCTTGCACACCTGAT 46449 ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct 181 TAACCCTTTGGTCATGCGTTGGCAGGTTGACGCCTTCTACGACCTTCTTGCACACCTGAT 240 Query 46450 AGACCAAGCCGAGCGGGCTACCGATCAGGTCGGAAATAGCGTTCATCGGCTGCTGGTGGA 46509 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || Sbjct 241 AGACCAAGCCGAGCGGGCTACCGATCAGGTCAGAAATGGCGTTCATCGGCTGCTGGCTGA 300 Query 46510 AAGGCAGGTCGTTTGCGTGGCGTTCCCGCCCTTTACCATACGCGGCTTGCGTCAGCGCAT 46569 | |||||||| || |||||||| || |||||||||||||||||||||||||||||||||| Sbjct 301 ACGGCAGGTCATTGGCGTGGCGCTCGCGCCCTTTACCATACGCGGCTTGCGTCAGCGCAT 360 Query 46570 CATGCAGCACTTTGACTAATTCGGAATAATCGTTGCTGTCTTTGACGTTACGGAATTCGT 46629 | || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 361 CGTGTAGCACTTTGACTAATTCGGAATAATCGTTGCTGTCTTTGACGTTCCGGAATTCGT 420 Query 46630 ACTGCCATGACCGGGCGGCCGACGGTGCAACGGCTTTCGGCGTGACGAGGGCTTCATCTA 46689 || |||||||||||| ||||||||||||||| |||| ||||| |||||||||||| | | Sbjct 421 ACCGCCATGACCGGGAGGCCGACGGTGCAACTGCTTCCGGCGCGACGAGGGCTTCGTTAA 480 Query 46690 GCGGCCATCCCTGCGCGAAGGCGAACATG 46718 ||||||| ||||||||||||||||||||| Sbjct 481 GCGGCCAGCCCTGCGCGAAGGCGAACATG 509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191040197350816